Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.07□□□□□ -1.6
LIG1P18858 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIG1P18858 AC016588.2-201ENST00000632484 3021 ntBASIC5.07□□□□□ -1.6
LIG1P18858 AC027287.1-201ENST00000553115 1453 ntBASIC5.07□□□□□ -1.6
LIG1P18858 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.06□□□□□ -1.6
LIG1P18858 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LIG1P18858 RNU6-26P-201ENST00000383985 107 ntBASIC5.06□□□□□ -1.6
LIG1P18858 RNU6-95P-201ENST00000384697 107 ntBASIC5.06□□□□□ -1.6
LIG1P18858 MIR513A2-201ENST00000385249 127 ntBASIC5.06□□□□□ -1.6
LIG1P18858 RNU6-1109P-201ENST00000391187 107 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 USMG5P1-201ENST00000425964 177 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AL669831.1-202ENST00000428504 417 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.06□□□□□ -1.6
LIG1P18858 AC012671.1-201ENST00000451912 203 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.06□□□□□ -1.6
LIG1P18858 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 AC117503.1-201ENST00000472241 394 ntBASIC5.06□□□□□ -1.6
LIG1P18858 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.06□□□□□ -1.6
LIG1P18858 AC026801.2-201ENST00000515352 425 ntBASIC5.06□□□□□ -1.6
LIG1P18858 RNU6-475P-201ENST00000516073 104 ntBASIC5.06□□□□□ -1.6
LIG1P18858 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIG1P18858 IGKV2D-36-201ENST00000518643 226 ntBASIC5.06□□□□□ -1.6
LIG1P18858 TOMM20P2-201ENST00000540082 421 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 AC006254.3-201ENST00000603353 884 ntBASIC5.06□□□□□ -1.6
LIG1P18858 AL031176.1-201ENST00000604554 466 ntBASIC5.06□□□□□ -1.6
LIG1P18858 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.06□□□□□ -1.6
LIG1P18858 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIG1P18858 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIG1P18858 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIG1P18858 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LIG1P18858 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIG1P18858 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 DDX10P1-201ENST00000448545 1933 ntBASIC5.05□□□□□ -1.6
LIG1P18858 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LIG1P18858 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.05□□□□□ -1.6
LIG1P18858 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.05□□□□□ -1.6
LIG1P18858 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
LIG1P18858 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.05□□□□□ -1.6
LIG1P18858 SNORD62.1-201ENST00000362541 86 ntBASIC5.05□□□□□ -1.6
LIG1P18858 RNU6-238P-201ENST00000363313 106 ntBASIC5.05□□□□□ -1.6
LIG1P18858 RNU6-715P-201ENST00000365204 103 ntBASIC5.05□□□□□ -1.6
LIG1P18858 Y_RNA.473-201ENST00000384333 102 ntBASIC5.05□□□□□ -1.6
LIG1P18858 RNA5SP397-201ENST00000391323 118 ntBASIC5.05□□□□□ -1.6
LIG1P18858 Z99755.1-201ENST00000414048 380 ntBASIC5.05□□□□□ -1.6
LIG1P18858 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.05□□□□□ -1.6
LIG1P18858 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.05□□□□□ -1.6
LIG1P18858 RPL21P126-201ENST00000470049 478 ntBASIC5.05□□□□□ -1.6
LIG1P18858 AC010631.1-201ENST00000474150 156 ntBASIC5.05□□□□□ -1.6
LIG1P18858 RPL7P23-201ENST00000493874 747 ntBASIC5.05□□□□□ -1.6
LIG1P18858 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 AC005798.1-201ENST00000513715 387 ntBASIC5.05□□□□□ -1.6
LIG1P18858 IGLVIV-65-201ENST00000517313 360 ntBASIC5.05□□□□□ -1.6
LIG1P18858 RNU6-323P-201ENST00000521915 107 ntBASIC5.05□□□□□ -1.6
LIG1P18858 AC026371.1-201ENST00000551867 419 ntBASIC5.05□□□□□ -1.6
LIG1P18858 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.05□□□□□ -1.6
LIG1P18858 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.05□□□□□ -1.6
LIG1P18858 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.05□□□□□ -1.6
LIG1P18858 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.05□□□□□ -1.6
LIG1P18858 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIG1P18858 AC025031.4-201ENST00000621248 3271 ntBASIC5.05□□□□□ -1.6
LIG1P18858 MFSD8-216ENST00000641147 4009 ntBASIC5.05□□□□□ -1.6
LIG1P18858 MARK2P15-201ENST00000432204 2186 ntBASIC5.05□□□□□ -1.6
LIG1P18858 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
LIG1P18858 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LIG1P18858 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIG1P18858 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LIG1P18858 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIG1P18858 RNU6-99P-201ENST00000364721 107 ntBASIC5.04□□□□□ -1.6
LIG1P18858 Y_RNA.389-201ENST00000383924 113 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RNU6-701P-201ENST00000384059 107 ntBASIC5.04□□□□□ -1.6
LIG1P18858 Y_RNA.493-201ENST00000384422 102 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RPS23P10-201ENST00000416185 486 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RPL21P109-201ENST00000422213 475 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RPL7AP25-201ENST00000423357 805 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RPL23AP1-201ENST00000428990 471 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AL591704.1-201ENST00000432574 275 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.04□□□□□ -1.6
LIG1P18858 AC009220.1-201ENST00000451614 275 ntBASIC5.04□□□□□ -1.6
LIG1P18858 FABP5P13-201ENST00000452144 328 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC234775.1-201ENST00000454247 670 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AL583843.1-201ENST00000456070 346 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.04□□□□□ -1.6
LIG1P18858 CEACAMP10-202ENST00000495431 496 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC022493.2-201ENST00000506122 481 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RNU6-307P-201ENST00000516743 106 ntBASIC5.04□□□□□ -1.6
LIG1P18858 RNU4-60P-201ENST00000517239 135 ntBASIC5.04□□□□□ -1.6
LIG1P18858 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.04□□□□□ -1.6
LIG1P18858 AC069240.1-201ENST00000548774 375 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.04□□□□□ -1.6
LIG1P18858 MIR4715-201ENST00000584117 79 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC020634.1-201ENST00000608701 549 ntBASIC5.04□□□□□ -1.6
LIG1P18858 AC107871.2-201ENST00000612894 502 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms