Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL1P09341 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL1P09341 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL1P09341 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CXCL1P09341 SNORA64-201ENST00000384674 134 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AL023284.1-201ENST00000403956 276 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 NDUFS5P1-201ENST00000405668 289 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CXCL1P09341 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC074117.2-201ENST00000417130 397 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC092634.6-201ENST00000418558 192 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 MTND2P5-201ENST00000432656 1006 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CXCL1P09341 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.32□□□□□ -2.2
CXCL1P09341 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CXCL1P09341 AC140059.1-201ENST00000489238 361 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.32□□□□□ -2.2
CXCL1P09341 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC096745.1-201ENST00000509945 370 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 MRPS33P3-201ENST00000513456 322 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 OR5AL2P-201ENST00000532185 920 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 CBX3P4-201ENST00000538909 354 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC090502.2-201ENST00000549267 280 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC104581.2-201ENST00000572227 430 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 MIR3126-201ENST00000577443 74 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.32□□□□□ -2.2
CXCL1P09341 AC004853.1-201ENST00000604902 698 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AL773524.1-201ENST00000614065 229 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AC004009.2-201ENST00000623016 728 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 AC106730.3-201ENST00000624568 641 ntBASIC1.32□□□□□ -2.2
CXCL1P09341 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.32□□□□□ -2.2
CXCL1P09341 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CXCL1P09341 ELF2P3-201ENST00000445099 1506 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CXCL1P09341 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 SNORA70.4-201ENST00000365509 134 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 RPL23AP29-201ENST00000397284 453 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 RN7SKP32-201ENST00000410167 303 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 NDUFS5P4-201ENST00000412983 318 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.31□□□□□ -2.2
CXCL1P09341 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC008850.1-201ENST00000427546 362 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CXCL1P09341 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CXCL1P09341 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 RPS20P20-201ENST00000460498 340 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC079203.1-201ENST00000487972 404 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.31□□□□□ -2.2
CXCL1P09341 RPL9P6-201ENST00000492764 598 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.31□□□□□ -2.2
CXCL1P09341 SNORD19.2-201ENST00000516978 73 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 AC243960.4-201ENST00000600532 288 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 AL160281.1-201ENST00000605307 311 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL1P09341 uc_338.14-201ENST00000613162 166 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 AL159972.1-201ENST00000625150 448 ntBASIC1.31□□□□□ -2.2
CXCL1P09341 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CXCL1P09341 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL1P09341 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL1P09341 RNU6-486P-201ENST00000363116 107 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RNU6-839P-201ENST00000363347 108 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 Y_RNA.333-201ENST00000365274 102 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
CXCL1P09341 AL079342.1-201ENST00000401460 267 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC019129.1-201ENST00000403786 261 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RNA5SP425-201ENST00000410336 112 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RN7SKP51-201ENST00000410781 304 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RNA5SP450-201ENST00000411206 102 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 USP9YP19-201ENST00000412165 485 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AL136133.1-201ENST00000413694 376 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AL161449.1-201ENST00000414531 1199 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 USP9YP13-201ENST00000417797 480 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.3□□□□□ -2.2
CXCL1P09341 Z98742.2-201ENST00000431564 187 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.3□□□□□ -2.2
CXCL1P09341 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL1P09341 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.3□□□□□ -2.2
CXCL1P09341 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL1P09341 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL1P09341 RPL23AP6-201ENST00000446637 472 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RPL12P25-201ENST00000455592 494 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms