Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL158053.1-201ENST00000441503 453 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 GPM6BP3-201ENST00000442797 145 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 RPL39P6-201ENST00000448289 150 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 PSPHP1-201ENST00000450062 261 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 TRGVB-201ENST00000453257 471 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 MRPL42P4-201ENST00000453267 443 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 MTND2P24-201ENST00000453434 806 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 ANKRD26P4-201ENST00000455755 950 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 RNU6-528P-201ENST00000516926 100 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 HSPA8P13-201ENST00000523715 472 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 HSPE1P3-201ENST00000559254 309 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC025811.1-201ENST00000604312 472 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC010975.3-201ENST00000618727 978 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC008443.7-201ENST00000622195 246 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 HPVC1-201ENST00000629899 1198 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MTCO1P4-201ENST00000520516 1409 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 Y_RNA.548-201ENST00000384656 105 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 SNORA11.2-201ENST00000408318 127 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AL356379.1-201ENST00000414105 126 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MTATP6P27-201ENST00000416987 621 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MTCYBP15-201ENST00000433123 1127 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AL121890.1-201ENST00000435457 205 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 RPS15AP5-201ENST00000436276 388 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MTCYBP11-201ENST00000447254 1109 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AL353718.1-201ENST00000451028 517 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 OFD1P3Y-201ENST00000453312 783 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 RPL21P99-201ENST00000480369 423 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC104564.1-201ENST00000493028 407 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC116337.1-201ENST00000509680 687 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 COL6A4P2-205ENST00000509855 506 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 RNU6-1261P-201ENST00000517194 104 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC118942.1-201ENST00000529674 1035 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AL138976.2-201ENST00000563989 694 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC104581.2-201ENST00000572227 430 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MIR4637-201ENST00000582405 84 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC090330.1-201ENST00000588646 764 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC011494.1-201ENST00000596454 237 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC084824.4-201ENST00000620106 731 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AL158801.5-201ENST00000623123 465 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC004944.1-201ENST00000517807 3059 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 CENPCP1-201ENST00000533085 2578 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
HLA-DQB2P05538 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQB2P05538 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 SNRPEP3-201ENST00000338402 276 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 RNU5E-8P-201ENST00000363502 116 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 SNRPEP2-201ENST00000397592 279 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AL450338.1-201ENST00000407987 512 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 RNU2-49P-201ENST00000410666 184 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 HMGB1P49-201ENST00000418882 569 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 UBE2FP3-201ENST00000436366 524 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 Z80107.1-201ENST00000436830 412 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 OR10R1P-201ENST00000441524 1141 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 MTATP6P7-201ENST00000453315 681 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC105252.1-201ENST00000503089 286 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 FAM92A1P2-202ENST00000504766 877 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 YWHAEP4-201ENST00000505390 198 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC093677.1-201ENST00000514414 678 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 MIR514B-201ENST00000516774 80 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 RNU6-250P-201ENST00000516958 103 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC044913.1-201ENST00000557200 430 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AP001542.2-201ENST00000593141 364 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AL158827.2-201ENST00000602494 330 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AL035411.2-201ENST00000604022 421 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 MTND4LP5-201ENST00000605152 292 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC026741.1-201ENST00000605892 482 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC012467.1-201ENST00000607740 256 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AL118556.2-201ENST00000614375 824 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms