Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 UBBP3-201ENST00000445497 241 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 Z96811.1-201ENST00000445880 108 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 RPL12P25-201ENST00000455592 494 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC008481.1-201ENST00000463278 396 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 RPS20P22-201ENST00000473700 357 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC010631.1-201ENST00000474150 156 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC126389.1-201ENST00000477436 290 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 RN7SKP24-201ENST00000515888 284 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 RNA5SP320-201ENST00000516263 124 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 MRPS36P3-201ENST00000519284 130 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC078814.3-201ENST00000553036 491 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AL391261.3-201ENST00000557194 520 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 RPL23AP84-201ENST00000571193 464 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC007336.1-201ENST00000576365 3828 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC020895.1-201ENST00000595362 272 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AL031281.1-201ENST00000604049 488 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC136601.2-201ENST00000604356 474 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 MIR6817-201ENST00000615588 66 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 FO624990.1-201ENST00000636373 85 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DPB1P04440 AC092125.1-201ENST00000562568 1995 ntBASIC2.14□□□□□ -2.07
HLA-DPB1P04440 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 MIR27B-201ENST00000385129 97 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 RNA5SP492-201ENST00000411330 114 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AL513331.1-201ENST00000411908 397 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 HMGB1P49-201ENST00000418882 569 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 MTND1P20-201ENST00000430341 950 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC010153.1-201ENST00000432862 727 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 RPL35AP22-201ENST00000436855 335 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 LARP1BP3-201ENST00000437229 869 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC009296.1-201ENST00000443146 155 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC055855.1-201ENST00000489563 579 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 RPS29P20-201ENST00000489592 171 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC106872.3-201ENST00000495104 446 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC138853.1-201ENST00000503549 823 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 SUMO2P6-201ENST00000505273 288 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 RNA5SP148-201ENST00000516527 94 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC087373.1-201ENST00000524920 491 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC087276.1-201ENST00000529659 480 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC010546.1-201ENST00000569391 485 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 HMGN2P15-201ENST00000585707 270 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC002545.1-201ENST00000592511 181 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 DPPA3P3-201ENST00000603842 430 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AP000676.3-201ENST00000623299 569 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
HLA-DPB1P04440 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DPB1P04440 CCT4P2-201ENST00000233836 1548 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL391994.1-201ENST00000254724 282 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNA5SP139-201ENST00000364340 117 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNU6-1200P-201ENST00000384162 107 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNU6-140P-201ENST00000384566 108 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RPL17P50-201ENST00000396131 546 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RPS4XP8-201ENST00000402039 771 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL139397.2-201ENST00000404529 772 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 MIR1305-201ENST00000408300 86 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RPL21P24-201ENST00000413752 448 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL022400.1-201ENST00000423946 935 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 GTF2IP20-201ENST00000431663 360 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNU7-23P-201ENST00000459465 62 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RPL23AP45-201ENST00000476406 468 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms