Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SUMO2P2-201ENST00000456482 255 ntBASIC1.93□□□□□ -2.1
APOEP02649 AC007182.2-201ENST00000489251 402 ntBASIC1.93□□□□□ -2.1
APOEP02649 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
APOEP02649 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
APOEP02649 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.93□□□□□ -2.1
APOEP02649 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
APOEP02649 BNIP3P24-201ENST00000593398 557 ntBASIC1.93□□□□□ -2.1
APOEP02649 RPP40P2-201ENST00000603596 712 ntBASIC1.93□□□□□ -2.1
APOEP02649 RPAP2P1-201ENST00000603626 1168 ntBASIC1.93□□□□□ -2.1
APOEP02649 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
APOEP02649 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.92□□□□□ -2.1
APOEP02649 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
APOEP02649 RNU6-492P-201ENST00000363035 104 ntBASIC1.92□□□□□ -2.1
APOEP02649 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
APOEP02649 SNORA40.18-201ENST00000391200 128 ntBASIC1.92□□□□□ -2.1
APOEP02649 AL109755.1-201ENST00000401791 649 ntBASIC1.92□□□□□ -2.1
APOEP02649 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.92□□□□□ -2.1
APOEP02649 CCDC58P2-201ENST00000417131 366 ntBASIC1.92□□□□□ -2.1
APOEP02649 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
APOEP02649 AC007919.1-201ENST00000429380 217 ntBASIC1.92□□□□□ -2.1
APOEP02649 HMGB1P9-201ENST00000429856 646 ntBASIC1.92□□□□□ -2.1
APOEP02649 ZFAND6P1-201ENST00000434138 605 ntBASIC1.92□□□□□ -2.1
APOEP02649 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.92□□□□□ -2.1
APOEP02649 RPL12P25-201ENST00000455592 494 ntBASIC1.92□□□□□ -2.1
APOEP02649 ATG12P2-201ENST00000456830 416 ntBASIC1.92□□□□□ -2.1
APOEP02649 MTCO2P9-201ENST00000503214 694 ntBASIC1.92□□□□□ -2.1
APOEP02649 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.92□□□□□ -2.1
APOEP02649 MTND4P2-201ENST00000507767 1203 ntBASIC1.92□□□□□ -2.1
APOEP02649 AC116337.1-201ENST00000509680 687 ntBASIC1.92□□□□□ -2.1
APOEP02649 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.92□□□□□ -2.1
APOEP02649 SNORA31.6-201ENST00000516241 130 ntBASIC1.92□□□□□ -2.1
APOEP02649 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
APOEP02649 SNORA76.2-201ENST00000517095 137 ntBASIC1.92□□□□□ -2.1
APOEP02649 AC008121.1-201ENST00000603244 268 ntBASIC1.92□□□□□ -2.1
APOEP02649 KATNBL1P5-201ENST00000605015 517 ntBASIC1.92□□□□□ -2.1
APOEP02649 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
APOEP02649 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
APOEP02649 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.92□□□□□ -2.1
APOEP02649 AC131280.1-202ENST00000624067 4211 ntBASIC1.92□□□□□ -2.1
APOEP02649 RNU6-884P-201ENST00000363889 107 ntBASIC1.91□□□□□ -2.1
APOEP02649 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
APOEP02649 RNU6-140P-201ENST00000384566 108 ntBASIC1.91□□□□□ -2.1
APOEP02649 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
APOEP02649 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
APOEP02649 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.91□□□□□ -2.1
APOEP02649 MTCYBP45-201ENST00000435243 565 ntBASIC1.91□□□□□ -2.1
APOEP02649 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.91□□□□□ -2.1
APOEP02649 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.91□□□□□ -2.1
APOEP02649 AC096571.1-202ENST00000506634 735 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC008837.1-201ENST00000511513 412 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 AC022447.1-201ENST00000515358 464 ntBASIC1.91□□□□□ -2.1
APOEP02649 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 AC007375.1-201ENST00000554513 578 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.91□□□□□ -2.1
APOEP02649 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
APOEP02649 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APOEP02649 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
APOEP02649 AP000403.1-201ENST00000603349 851 ntBASIC1.91□□□□□ -2.1
APOEP02649 AL161729.4-201ENST00000604650 476 ntBASIC1.91□□□□□ -2.1
APOEP02649 AL021997.1-201ENST00000605757 193 ntBASIC1.91□□□□□ -2.1
APOEP02649 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
APOEP02649 AC104307.1-201ENST00000616142 196 ntBASIC1.91□□□□□ -2.1
APOEP02649 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APOEP02649 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.91□□□□□ -2.1
APOEP02649 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
APOEP02649 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.9□□□□□ -2.1
APOEP02649 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
APOEP02649 RNU6-741P-201ENST00000383889 107 ntBASIC1.9□□□□□ -2.11
APOEP02649 AL592310.1-201ENST00000414330 671 ntBASIC1.9□□□□□ -2.11
APOEP02649 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.9□□□□□ -2.11
APOEP02649 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
APOEP02649 ZNF863P-201ENST00000426746 417 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC008850.1-201ENST00000427546 362 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.9□□□□□ -2.11
APOEP02649 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.9□□□□□ -2.11
APOEP02649 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
APOEP02649 FDX1P2-201ENST00000450769 375 ntBASIC1.9□□□□□ -2.11
APOEP02649 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.9□□□□□ -2.11
APOEP02649 RPL26P9-201ENST00000457466 433 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.9□□□□□ -2.11
APOEP02649 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOEP02649 RNU6-1102P-201ENST00000516149 96 ntBASIC1.9□□□□□ -2.11
APOEP02649 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
APOEP02649 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
APOEP02649 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.9□□□□□ -2.11
APOEP02649 AC005951.2-201ENST00000576282 495 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC022662.1-201ENST00000580252 331 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC011494.1-201ENST00000596454 237 ntBASIC1.9□□□□□ -2.11
APOEP02649 AP003973.1-201ENST00000604639 691 ntBASIC1.9□□□□□ -2.11
APOEP02649 AC004908.2-201ENST00000609090 574 ntBASIC1.9□□□□□ -2.11
APOEP02649 AL589743.7-201ENST00000612637 233 ntBASIC1.9□□□□□ -2.11
APOEP02649 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
APOEP02649 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms