Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 ELOCP16-201ENST00000444494 332 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.34□□□□□ -2.2
POLR1AO95602 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.34□□□□□ -2.2
POLR1AO95602 FAM71BP1-201ENST00000604431 523 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 AC004908.2-201ENST00000609090 574 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 SDR42E1P2-201ENST00000614861 481 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 SDR42E1P4-201ENST00000620894 481 ntBASIC1.34□□□□□ -2.2
POLR1AO95602 SNORD14B-201ENST00000364533 90 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
POLR1AO95602 RNU2-41P-201ENST00000410991 178 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR1AO95602 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR1AO95602 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 AL121769.1-201ENST00000469473 401 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 AC107032.1-201ENST00000485945 480 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 KATNBL1P4-201ENST00000503545 918 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR1AO95602 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR1AO95602 AC087465.1-201ENST00000560574 245 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 MIR4658-201ENST00000584344 65 ntBASIC1.33□□□□□ -2.2
POLR1AO95602 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR1AO95602 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
POLR1AO95602 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
POLR1AO95602 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
POLR1AO95602 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 AC233728.2-201ENST00000425348 757 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.32□□□□□ -2.2
POLR1AO95602 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 AC087879.1-201ENST00000474343 374 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 AL135752.1-201ENST00000479477 471 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.32□□□□□ -2.2
POLR1AO95602 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.32□□□□□ -2.2
POLR1AO95602 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.32□□□□□ -2.2
POLR1AO95602 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.32□□□□□ -2.2
POLR1AO95602 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
POLR1AO95602 AP002784.2-201ENST00000397300 549 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.32□□□□□ -2.2
POLR1AO95602 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1AO95602 RPS23P4-201ENST00000487908 423 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 AC112198.4-201ENST00000515450 351 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 PRELID3BP4-201ENST00000515476 571 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 RNU6-1073P-201ENST00000517182 106 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 MTCYBP41-201ENST00000528913 1123 ntBASIC1.32□□□□□ -2.2
POLR1AO95602 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
POLR1AO95602 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
POLR1AO95602 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.32□□□□□ -2.2
POLR1AO95602 ZNF519P1-201ENST00000449011 1626 ntBASIC1.31□□□□□ -2.2
POLR1AO95602 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
POLR1AO95602 AC004022.2-201ENST00000413824 193 ntBASIC1.31□□□□□ -2.2
POLR1AO95602 AC010099.1-201ENST00000455434 375 ntBASIC1.31□□□□□ -2.2
POLR1AO95602 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.31□□□□□ -2.2
POLR1AO95602 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.31□□□□□ -2.2
POLR1AO95602 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
POLR1AO95602 AC106791.2-201ENST00000604680 391 ntBASIC1.31□□□□□ -2.2
POLR1AO95602 AC020923.1-201ENST00000624021 917 ntBASIC1.31□□□□□ -2.2
POLR1AO95602 MTND4P31-201ENST00000425607 1343 ntBASIC1.3□□□□□ -2.2
POLR1AO95602 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
POLR1AO95602 RNU6-492P-201ENST00000363035 104 ntBASIC1.3□□□□□ -2.2
POLR1AO95602 RABEPKP1-201ENST00000440529 1026 ntBASIC1.3□□□□□ -2.2
POLR1AO95602 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.3□□□□□ -2.2
POLR1AO95602 ERHP1-201ENST00000523006 310 ntBASIC1.3□□□□□ -2.2
POLR1AO95602 MIR6076-201ENST00000617521 113 ntBASIC1.3□□□□□ -2.2
POLR1AO95602 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
POLR1AO95602 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
POLR1AO95602 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
POLR1AO95602 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.3□□□□□ -2.2
POLR1AO95602 DEFB108F-201ENST00000344638 222 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 SFR1P2-201ENST00000421841 730 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AL606495.1-201ENST00000422100 813 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC007560.1-201ENST00000426912 237 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 NAP1L1P3-201ENST00000462291 880 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 HMGB1P38-201ENST00000490557 577 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.29□□□□□ -2.2
POLR1AO95602 AC105914.1-201ENST00000511798 226 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.29□□□□□ -2.2
POLR1AO95602 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.29□□□□□ -2.2
POLR1AO95602 NUTF2P8-201ENST00000604593 363 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AL136363.1-201ENST00000605349 337 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC107214.2-201ENST00000608204 634 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.29□□□□□ -2.2
POLR1AO95602 MIR924-201ENST00000638017 53 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
POLR1AO95602 AC018630.2-201ENST00000534866 2403 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
POLR1AO95602 AC093155.1-201ENST00000440164 826 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC078857.1-201ENST00000469870 667 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC008676.3-201ENST00000521237 435 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AL355297.2-201ENST00000604792 129 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AL118508.4-201ENST00000624142 1176 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 AC110079.1-202ENST00000635213 138 ntBASIC1.29□□□□□ -2.2
POLR1AO95602 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
POLR1AO95602 AL589743.1-201ENST00000551932 2712 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms