Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SNORA26.8-201ENST00000391306 124 ntBASIC3.54□□□□□ -1.84
MBD4O95243 AC245054.2-201ENST00000415639 319 ntBASIC3.54□□□□□ -1.84
MBD4O95243 BTF3L4P3-201ENST00000418879 476 ntBASIC3.54□□□□□ -1.84
MBD4O95243 AC137499.1-201ENST00000427602 88 ntBASIC3.54□□□□□ -1.84
MBD4O95243 OR2B8P-201ENST00000432841 938 ntBASIC3.54□□□□□ -1.84
MBD4O95243 ARPC3P1-201ENST00000437218 533 ntBASIC3.54□□□□□ -1.84
MBD4O95243 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
MBD4O95243 TRIM60P18-201ENST00000441518 828 ntBASIC3.54□□□□□ -1.84
MBD4O95243 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD4O95243 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD4O95243 MTCO2P29-201ENST00000465212 189 ntBASIC3.54□□□□□ -1.84
MBD4O95243 RPS3AP14-201ENST00000483907 780 ntBASIC3.54□□□□□ -1.84
MBD4O95243 RN7SL432P-201ENST00000484057 298 ntBASIC3.54□□□□□ -1.84
MBD4O95243 ARL4AP2-201ENST00000507378 601 ntBASIC3.54□□□□□ -1.84
MBD4O95243 SNORA31.3-201ENST00000516029 96 ntBASIC3.54□□□□□ -1.84
MBD4O95243 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD4O95243 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD4O95243 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD4O95243 AL137843.1-201ENST00000605078 385 ntBASIC3.54□□□□□ -1.84
MBD4O95243 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
MBD4O95243 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.54□□□□□ -1.84
MBD4O95243 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD4O95243 AL137790.1-201ENST00000634283 177 ntBASIC3.54□□□□□ -1.84
MBD4O95243 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD4O95243 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD4O95243 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MBD4O95243 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD4O95243 MTND5P29-201ENST00000458676 1807 ntBASIC3.54□□□□□ -1.84
MBD4O95243 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD4O95243 AL359693.1-201ENST00000614959 2407 ntBASIC3.53□□□□□ -1.84
MBD4O95243 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD4O95243 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD4O95243 RNU6-1167P-201ENST00000363227 94 ntBASIC3.53□□□□□ -1.84
MBD4O95243 RNA5SP274-201ENST00000410484 108 ntBASIC3.53□□□□□ -1.84
MBD4O95243 NPM1P11-201ENST00000417106 855 ntBASIC3.53□□□□□ -1.84
MBD4O95243 SEPT2P1-201ENST00000419651 180 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC119618.1-201ENST00000434191 222 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AL714022.1-201ENST00000439897 151 ntBASIC3.53□□□□□ -1.84
MBD4O95243 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD4O95243 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.53□□□□□ -1.84
MBD4O95243 DDX3P2-201ENST00000446138 111 ntBASIC3.53□□□□□ -1.84
MBD4O95243 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD4O95243 RNU7-23P-201ENST00000459465 62 ntBASIC3.53□□□□□ -1.84
MBD4O95243 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.53□□□□□ -1.84
MBD4O95243 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD4O95243 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD4O95243 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD4O95243 RPL21P5-201ENST00000554662 472 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD4O95243 MIR548AB-201ENST00000584917 84 ntBASIC3.53□□□□□ -1.84
MBD4O95243 U73023.1-201ENST00000603134 700 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC107294.1-201ENST00000609524 467 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC103710.2-201ENST00000609912 942 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC099654.13-201ENST00000639774 207 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
MBD4O95243 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD4O95243 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
MBD4O95243 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD4O95243 API5P2-201ENST00000397055 1498 ntBASIC3.53□□□□□ -1.84
MBD4O95243 AL035425.3-201ENST00000564206 4996 ntBASIC3.53□□□□□ -1.84
MBD4O95243 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
MBD4O95243 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD4O95243 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
MBD4O95243 AC092435.3-201ENST00000565538 3654 ntBASIC3.52□□□□□ -1.85
MBD4O95243 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
MBD4O95243 FTLP6-201ENST00000355274 422 ntBASIC3.52□□□□□ -1.85
MBD4O95243 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
MBD4O95243 DYNLT3P1-201ENST00000378574 347 ntBASIC3.52□□□□□ -1.85
MBD4O95243 AL122016.1-201ENST00000403365 367 ntBASIC3.52□□□□□ -1.85
MBD4O95243 RNU2-8P-201ENST00000410727 190 ntBASIC3.52□□□□□ -1.85
MBD4O95243 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD4O95243 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD4O95243 DPPA2P1-201ENST00000428060 556 ntBASIC3.52□□□□□ -1.85
MBD4O95243 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD4O95243 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD4O95243 AC025750.2-201ENST00000442609 450 ntBASIC3.52□□□□□ -1.85
MBD4O95243 TAF9P1-201ENST00000445421 515 ntBASIC3.52□□□□□ -1.85
MBD4O95243 AC125238.1-201ENST00000448842 249 ntBASIC3.52□□□□□ -1.85
MBD4O95243 TAF9P2-201ENST00000454958 515 ntBASIC3.52□□□□□ -1.85
MBD4O95243 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD4O95243 AC091179.1-201ENST00000461606 579 ntBASIC3.52□□□□□ -1.85
MBD4O95243 AC006483.1-201ENST00000487308 313 ntBASIC3.52□□□□□ -1.85
MBD4O95243 SCGB1D5P-201ENST00000515134 247 ntBASIC3.52□□□□□ -1.85
MBD4O95243 MTND2P38-201ENST00000522536 667 ntBASIC3.52□□□□□ -1.85
MBD4O95243 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD4O95243 BNIP3P8-201ENST00000597863 560 ntBASIC3.52□□□□□ -1.85
MBD4O95243 Z99497.2-201ENST00000603634 310 ntBASIC3.52□□□□□ -1.85
MBD4O95243 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MBD4O95243 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD4O95243 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD4O95243 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
MBD4O95243 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
MBD4O95243 RNU4-91P-201ENST00000364778 135 ntBASIC3.51□□□□□ -1.85
MBD4O95243 RNU6-701P-201ENST00000384059 107 ntBASIC3.51□□□□□ -1.85
MBD4O95243 AL021407.1-201ENST00000404531 386 ntBASIC3.51□□□□□ -1.85
MBD4O95243 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD4O95243 NDUFB4P5-201ENST00000415445 361 ntBASIC3.51□□□□□ -1.85
MBD4O95243 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.51□□□□□ -1.85
MBD4O95243 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms