Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC098831.1-201ENST00000440661 216 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AL139109.1-201ENST00000455491 297 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 ANKRD26P4-201ENST00000455755 950 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 TRBV1-201ENST00000476502 284 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1BO75841 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1BO75841 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.93□□□□□ -2.1
UPK1BO75841 AC093809.1-201ENST00000509155 340 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 SAP18P1-201ENST00000512058 390 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC010374.2-201ENST00000512933 535 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
UPK1BO75841 AC110760.3-202ENST00000515177 371 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 RN7SKP24-201ENST00000515888 284 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.93□□□□□ -2.1
UPK1BO75841 AC109329.2-201ENST00000519658 482 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 OR5AQ1P-201ENST00000527596 927 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1BO75841 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.93□□□□□ -2.1
UPK1BO75841 YWHAZP1-201ENST00000556286 722 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC106782.4-201ENST00000568264 210 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC007151.1-201ENST00000572774 483 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1BO75841 RPP40P2-201ENST00000603596 712 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC098826.3-201ENST00000603823 466 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC069431.2-201ENST00000604149 1099 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 ELOCP35-201ENST00000604289 336 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AL021997.1-201ENST00000605757 193 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1BO75841 AC006386.1-201ENST00000619436 415 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 AC007490.1-201ENST00000624321 703 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 PCMTD1P7-201ENST00000634506 357 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 CU459211.1-201ENST00000635667 749 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
UPK1BO75841 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
UPK1BO75841 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC010329.5-201ENST00000623497 2174 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.92□□□□□ -2.1
UPK1BO75841 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1BO75841 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1BO75841 RNU5E-10P-201ENST00000363506 118 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 MIR449B-201ENST00000384995 97 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AL359511.1-201ENST00000402970 211 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 RNU6-920P-201ENST00000410926 92 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 RNU4-22P-201ENST00000411058 166 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AL030996.1-201ENST00000411430 235 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 CYCSP48-201ENST00000417124 323 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 USP9YP26-201ENST00000421008 661 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC244035.1-201ENST00000430042 390 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 ELOCP30-201ENST00000447108 299 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.92□□□□□ -2.1
UPK1BO75841 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 AC013267.1-201ENST00000458227 267 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC005410.1-202ENST00000460347 485 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.92□□□□□ -2.1
UPK1BO75841 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1BO75841 AC009712.1-201ENST00000564938 316 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC034105.4-201ENST00000568304 277 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 MIR5571-201ENST00000577998 113 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 AP001269.3-201ENST00000588718 329 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AL391813.1-201ENST00000603098 260 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AL161798.1-201ENST00000604630 131 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1BO75841 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
UPK1BO75841 AP000676.3-201ENST00000623299 569 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 AC097655.1-201ENST00000635075 318 ntBASIC1.92□□□□□ -2.1
UPK1BO75841 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1BO75841 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1BO75841 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
UPK1BO75841 ADAM3A-203ENST00000461344 2157 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RNU6-512P-201ENST00000364438 103 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 MIR183-201ENST00000384958 110 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 MIR524-201ENST00000385242 87 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 MIR134-201ENST00000385258 73 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
UPK1BO75841 AC119751.3-201ENST00000399720 670 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 UBA52P6-201ENST00000399822 382 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RNU4-72P-201ENST00000410754 173 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RNU2-68P-201ENST00000410878 191 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RNA5SP120-201ENST00000410900 112 ntBASIC1.91□□□□□ -2.1
UPK1BO75841 RPL17P12-201ENST00000413391 526 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms