Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNORD14B-201ENST00000364533 90 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC004865.1-201ENST00000442276 1003 ntBASIC0.4□□□□□ -2.35
USH2AO75445 RNA5SP310-201ENST00000459084 116 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC010625.1-201ENST00000511296 403 ntBASIC0.4□□□□□ -2.35
USH2AO75445 SNORA31.20-201ENST00000517111 133 ntBASIC0.4□□□□□ -2.35
USH2AO75445 CYCSP26-201ENST00000534107 320 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
USH2AO75445 MIR6840-201ENST00000611937 71 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.4□□□□□ -2.35
USH2AO75445 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
USH2AO75445 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.4□□□□□ -2.35
USH2AO75445 RNU6-185P-201ENST00000384421 107 ntBASIC0.4□□□□□ -2.35
USH2AO75445 RNU6-700P-201ENST00000391043 107 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.4□□□□□ -2.35
USH2AO75445 AL591704.2-201ENST00000421658 181 ntBASIC0.4□□□□□ -2.35
USH2AO75445 RPS29P23-201ENST00000458635 123 ntBASIC0.4□□□□□ -2.35
USH2AO75445 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
USH2AO75445 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.4□□□□□ -2.35
USH2AO75445 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.4□□□□□ -2.35
USH2AO75445 AL391516.1-201ENST00000554380 2449 ntBASIC0.4□□□□□ -2.35
USH2AO75445 MTND5P11-201ENST00000511037 1812 ntBASIC0.39□□□□□ -2.35
USH2AO75445 RNU6-112P-201ENST00000363599 104 ntBASIC0.39□□□□□ -2.35
USH2AO75445 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 AL591043.1-201ENST00000432461 424 ntBASIC0.39□□□□□ -2.35
USH2AO75445 IFNA20P-201ENST00000436840 528 ntBASIC0.39□□□□□ -2.35
USH2AO75445 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.39□□□□□ -2.35
USH2AO75445 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 AC073111.2-201ENST00000605657 1075 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC006338.1-201ENST00000618453 749 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC130454.1-201ENST00000622948 401 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC004943.3-201ENST00000624116 600 ntBASIC0.39□□□□□ -2.35
USH2AO75445 RNU1-62P-201ENST00000362599 164 ntBASIC0.39□□□□□ -2.35
USH2AO75445 SNORD114-2-201ENST00000363953 78 ntBASIC0.39□□□□□ -2.35
USH2AO75445 Y_RNA.468-201ENST00000384298 102 ntBASIC0.39□□□□□ -2.35
USH2AO75445 RN7SKP51-201ENST00000410781 304 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC096649.2-201ENST00000416186 393 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC092832.1-201ENST00000422934 400 ntBASIC0.39□□□□□ -2.35
USH2AO75445 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.39□□□□□ -2.35
USH2AO75445 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 MTND6P13-201ENST00000443510 523 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.39□□□□□ -2.35
USH2AO75445 AP003327.1-201ENST00000529684 127 ntBASIC0.39□□□□□ -2.35
USH2AO75445 MIR4698-201ENST00000577795 80 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.39□□□□□ -2.35
USH2AO75445 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
USH2AO75445 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 PGBD4P3-201ENST00000440731 581 ntBASIC0.39□□□□□ -2.35
USH2AO75445 SEM1P1-201ENST00000506694 209 ntBASIC0.39□□□□□ -2.35
USH2AO75445 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.39□□□□□ -2.35
USH2AO75445 AL627230.6-201ENST00000611129 280 ntBASIC0.39□□□□□ -2.35
USH2AO75445 SNORA62.1-201ENST00000364287 154 ntBASIC0.39□□□□□ -2.35
USH2AO75445 SNORA8.3-201ENST00000384679 139 ntBASIC0.39□□□□□ -2.35
USH2AO75445 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
USH2AO75445 RPL21P104-201ENST00000464143 478 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC022493.1-201ENST00000492984 337 ntBASIC0.39□□□□□ -2.35
USH2AO75445 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.39□□□□□ -2.35
USH2AO75445 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.39□□□□□ -2.35
USH2AO75445 OR5AQ1P-201ENST00000527596 927 ntBASIC0.39□□□□□ -2.35
USH2AO75445 RNY1P9-201ENST00000532431 109 ntBASIC0.39□□□□□ -2.35
USH2AO75445 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
USH2AO75445 RNU4-73P-201ENST00000363164 141 ntBASIC0.38□□□□□ -2.35
USH2AO75445 RNA5SP368-201ENST00000364298 116 ntBASIC0.38□□□□□ -2.35
USH2AO75445 Y_RNA.375-201ENST00000365625 101 ntBASIC0.38□□□□□ -2.35
USH2AO75445 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 RNA5SP299-201ENST00000391203 116 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.38□□□□□ -2.35
USH2AO75445 TRBVB-201ENST00000477100 408 ntBASIC0.38□□□□□ -2.35
USH2AO75445 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 AC009452.1-201ENST00000640823 606 ntBASIC0.38□□□□□ -2.35
USH2AO75445 OR4G2P-201ENST00000328113 903 ntBASIC0.38□□□□□ -2.35
USH2AO75445 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.38□□□□□ -2.35
USH2AO75445 RNA5SP167-201ENST00000365461 116 ntBASIC0.38□□□□□ -2.35
USH2AO75445 MIR604-201ENST00000384880 94 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.38□□□□□ -2.35
USH2AO75445 XKRYP6-201ENST00000440468 1116 ntBASIC0.38□□□□□ -2.35
USH2AO75445 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.38□□□□□ -2.35
USH2AO75445 XKRYP3-201ENST00000442113 1116 ntBASIC0.38□□□□□ -2.35
USH2AO75445 NAP1L1P3-201ENST00000462291 880 ntBASIC0.38□□□□□ -2.35
USH2AO75445 RNU6-496P-201ENST00000516145 99 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AC022880.1-201ENST00000534017 973 ntBASIC0.38□□□□□ -2.35
USH2AO75445 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 Y_RNA.552-201ENST00000384665 112 ntBASIC0.38□□□□□ -2.35
USH2AO75445 MIR518A2-201ENST00000384966 87 ntBASIC0.38□□□□□ -2.35
USH2AO75445 MTCO1P3-201ENST00000429327 192 ntBASIC0.38□□□□□ -2.35
USH2AO75445 SNORA31.23-201ENST00000517219 133 ntBASIC0.38□□□□□ -2.35
USH2AO75445 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.38□□□□□ -2.35
USH2AO75445 AL163153.1-201ENST00000554223 283 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AC140725.3-201ENST00000616193 880 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AP000648.3-201ENST00000623539 4507 ntBASIC0.38□□□□□ -2.35
USH2AO75445 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 RNU4-38P-201ENST00000364472 129 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms