Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MTND5P2-201ENST00000442927 1142 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 MTCO3P45-201ENST00000443036 613 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 ELOCP30-201ENST00000447108 299 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM3O75382 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 MTCO1P42-201ENST00000457379 726 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC008481.1-201ENST00000463278 396 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM3O75382 AP000852.1-201ENST00000472460 573 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC010631.1-201ENST00000474150 156 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 KC877373.1-201ENST00000479066 408 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 MTCYBP35-201ENST00000503630 1137 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM3O75382 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC116347.2-201ENST00000514912 523 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 RNU1-103P-201ENST00000516502 125 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 RNU6-678P-201ENST00000516832 109 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC123904.3-201ENST00000547218 814 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 CYCSP39-201ENST00000565821 309 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC012435.1-202ENST00000568772 240 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC002545.1-201ENST00000592511 181 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC068790.3-201ENST00000602988 553 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 RPL12P50-201ENST00000603116 116 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM3O75382 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM3O75382 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 AC091965.5-201ENST00000624785 342 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM3O75382 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM3O75382 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM3O75382 CR848007.1-201ENST00000442354 1699 ntBASIC2.6□□□□□ -1.99
TRIM3O75382 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM3O75382 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM3O75382 RNU6-461P-201ENST00000364195 107 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM3O75382 RPL21P24-201ENST00000413752 448 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 Z85995.1-201ENST00000415547 335 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM3O75382 AL451054.2-201ENST00000420896 202 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM3O75382 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM3O75382 RPS24P13-201ENST00000442520 397 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 ST13P20-201ENST00000447996 1065 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM3O75382 RNU7-23P-201ENST00000459465 62 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC068587.2-201ENST00000478386 781 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM3O75382 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM3O75382 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM3O75382 HMGB1P41-201ENST00000520234 440 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM3O75382 HPRT1P3-201ENST00000539521 576 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM3O75382 AP001004.1-201ENST00000582468 324 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM3O75382 AC008751.2-201ENST00000597885 980 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC004908.2-201ENST00000609090 574 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL355472.4-201ENST00000610233 626 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL356266.1-201ENST00000623311 483 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AL136313.1-201ENST00000624804 202 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 AC097655.1-201ENST00000635075 318 ntBASIC2.59□□□□□ -1.99
TRIM3O75382 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
TRIM3O75382 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
TRIM3O75382 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
TRIM3O75382 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.58□□□□□ -2
TRIM3O75382 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM3O75382 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.58□□□□□ -2
TRIM3O75382 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM3O75382 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
TRIM3O75382 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
TRIM3O75382 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 AC105272.1-201ENST00000438604 198 ntBASIC2.58□□□□□ -2
TRIM3O75382 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 MTATP6P30-201ENST00000443540 664 ntBASIC2.58□□□□□ -2
TRIM3O75382 DPPA3P1-201ENST00000448050 469 ntBASIC2.58□□□□□ -2
TRIM3O75382 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 AC117522.3-201ENST00000507974 584 ntBASIC2.58□□□□□ -2
TRIM3O75382 AC008716.1-201ENST00000511084 513 ntBASIC2.58□□□□□ -2
TRIM3O75382 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.58□□□□□ -2
TRIM3O75382 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
TRIM3O75382 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms