Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4BO75351 AC019176.2-201ENST00000611579 315 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AL589994.2-201ENST00000621124 579 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4BO75351 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS4BO75351 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 TPTE2P4-201ENST00000258589 1605 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
VPS4BO75351 SDAD1P2-201ENST00000441308 2028 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VPS4BO75351 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4BO75351 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4BO75351 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS4BO75351 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 AC121333.1-201ENST00000567488 2709 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 Y_RNA.529-201ENST00000384586 119 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 SNORD37.1-201ENST00000390968 65 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 RNU6-550P-201ENST00000391057 101 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4BO75351 MTND3P8-201ENST00000412909 339 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC007390.1-201ENST00000415722 356 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4BO75351 AC079780.1-201ENST00000428259 207 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 IFNA20P-201ENST00000436840 528 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4BO75351 AC007547.1-201ENST00000462177 490 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 RN7SL93P-201ENST00000463035 293 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4BO75351 CCDC34P1-201ENST00000507441 517 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4BO75351 AC109635.4-202ENST00000531666 412 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC243972.3-201ENST00000539655 198 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4BO75351 GLYCAM1-201ENST00000546596 285 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4BO75351 AL118558.2-201ENST00000556294 238 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4BO75351 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4BO75351 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4BO75351 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 SRGNP1-201ENST00000603392 451 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC012409.4-201ENST00000612923 249 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AL390240.1-201ENST00000612950 384 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 uc_338.34-201ENST00000617467 174 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 MIR7151-201ENST00000617477 60 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AL360181.4-201ENST00000621752 134 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC244205.2-202ENST00000635781 342 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 AC112487.2-201ENST00000637950 304 ntBASIC3.86□□□□□ -1.79
VPS4BO75351 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS4BO75351 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4BO75351 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS4BO75351 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 PRO1804-201ENST00000623780 2050 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS4BO75351 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 RNU6-82P-201ENST00000363970 107 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 RNU4-66P-201ENST00000365199 138 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 Y_RNA.535-201ENST00000384612 99 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 HLFP1-201ENST00000402375 499 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AL592114.1-201ENST00000403842 483 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 RNU4-26P-201ENST00000410270 107 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 BX323014.1-201ENST00000412876 237 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 EEF1A1P40-201ENST00000412883 573 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4BO75351 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4BO75351 HMGB3P30-201ENST00000457863 606 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 RNU6-329P-201ENST00000459618 107 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC078817.1-201ENST00000492623 435 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 RPL23AP55-201ENST00000498163 452 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 MTCO3P9-201ENST00000506989 781 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 RBBP4P6-201ENST00000508098 202 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 KLHL2P1-201ENST00000508691 521 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4BO75351 RNU6-390P-201ENST00000516259 103 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 MIR2114-201ENST00000516645 80 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 SNORA70.24-201ENST00000517233 118 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 MTND4P7-201ENST00000523876 130 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4BO75351 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC005951.2-201ENST00000576282 495 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 MIR4644-201ENST00000579929 84 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC010928.3-201ENST00000587712 541 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms