Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HMGB1P17-201ENST00000403495 628 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 PTGES3P2-201ENST00000407942 482 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.1□□□□□ -2.07
SHOX2O60902 MTCO2P5-201ENST00000422621 426 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.1□□□□□ -2.07
SHOX2O60902 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.1□□□□□ -2.07
SHOX2O60902 AC114981.1-201ENST00000503897 678 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC096571.1-202ENST00000506634 735 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.1□□□□□ -2.07
SHOX2O60902 RNU6-528P-201ENST00000516926 100 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 MTCYBP20-201ENST00000524239 1129 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.1□□□□□ -2.07
SHOX2O60902 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
SHOX2O60902 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.1□□□□□ -2.07
SHOX2O60902 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.1□□□□□ -2.07
SHOX2O60902 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.1□□□□□ -2.07
SHOX2O60902 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
SHOX2O60902 VN1R87P-201ENST00000596706 487 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC005332.6-201ENST00000613178 446 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC013476.2-201ENST00000614456 459 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC253576.2-201ENST00000618815 580 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC084824.4-201ENST00000620106 731 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 MIR7515-201ENST00000637837 67 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AC002543.1-201ENST00000299783 1954 ntBASIC2.1□□□□□ -2.07
SHOX2O60902 AL354685.2-201ENST00000448218 1447 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 Y_RNA.595-201ENST00000410403 105 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AL513331.1-201ENST00000411908 397 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 UBE2D3P3-201ENST00000426992 425 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC008850.1-201ENST00000427546 362 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.09□□□□□ -2.07
SHOX2O60902 OR10R1P-201ENST00000441524 1141 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 BTBD7P2-201ENST00000441962 620 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AL096829.2-201ENST00000446582 742 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.09□□□□□ -2.07
SHOX2O60902 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
SHOX2O60902 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.09□□□□□ -2.07
SHOX2O60902 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.09□□□□□ -2.07
SHOX2O60902 SNRPGP1-201ENST00000553864 222 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 AC122134.1-202ENST00000569111 1201 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 RPS15AP11-201ENST00000594193 385 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOX2O60902 AC103710.4-201ENST00000609301 899 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC008498.1-201ENST00000613012 531 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AL590099.1-201ENST00000615276 138 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 AC002550.2-201ENST00000621246 394 ntBASIC2.09□□□□□ -2.07
SHOX2O60902 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
SHOX2O60902 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHOX2O60902 AC010329.5-201ENST00000623497 2174 ntBASIC2.09□□□□□ -2.08
SHOX2O60902 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SHOX2O60902 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
SHOX2O60902 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SHOX2O60902 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHOX2O60902 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.08□□□□□ -2.08
SHOX2O60902 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.08□□□□□ -2.08
SHOX2O60902 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 MTCO1P3-201ENST00000429327 192 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 SEPT7P5-201ENST00000434048 306 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 UBE2FP3-201ENST00000436366 524 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.08□□□□□ -2.08
SHOX2O60902 MTCO1P42-201ENST00000457379 726 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 LARP1BP2-201ENST00000486594 519 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 RN7SL636P-201ENST00000497504 294 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 TMEM251P1-201ENST00000503717 318 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 RNU6-334P-201ENST00000517072 102 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.08□□□□□ -2.08
SHOX2O60902 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.08□□□□□ -2.08
SHOX2O60902 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.08□□□□□ -2.08
SHOX2O60902 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.08□□□□□ -2.08
SHOX2O60902 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.08□□□□□ -2.08
SHOX2O60902 RPP40P2-201ENST00000603596 712 ntBASIC2.08□□□□□ -2.08
SHOX2O60902 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.08□□□□□ -2.08
SHOX2O60902 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHOX2O60902 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHOX2O60902 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.08□□□□□ -2.08
SHOX2O60902 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHOX2O60902 RNU6-236P-201ENST00000363886 106 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 RNU6-707P-201ENST00000364647 95 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHOX2O60902 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 TPMTP3-201ENST00000411928 735 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.07□□□□□ -2.08
SHOX2O60902 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.07□□□□□ -2.08
SHOX2O60902 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.07□□□□□ -2.08
SHOX2O60902 ZNF863P-201ENST00000426746 417 ntBASIC2.07□□□□□ -2.08
SHOX2O60902 FO393414.1-201ENST00000428697 1184 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms