Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.9□□□□□ -1.94
SNX3O60493 CR848007.1-201ENST00000442354 1699 ntBASIC2.9□□□□□ -1.95
SNX3O60493 HSPE1P11-201ENST00000339579 310 ntBASIC2.9□□□□□ -1.95
SNX3O60493 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SNX3O60493 RNU6-1167P-201ENST00000363227 94 ntBASIC2.9□□□□□ -1.95
SNX3O60493 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX3O60493 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SNX3O60493 DEFB108C-201ENST00000400154 252 ntBASIC2.9□□□□□ -1.95
SNX3O60493 CDK8P2-201ENST00000415020 547 ntBASIC2.9□□□□□ -1.95
SNX3O60493 SYF2P2-201ENST00000417620 583 ntBASIC2.9□□□□□ -1.95
SNX3O60493 BX295541.1-201ENST00000417774 250 ntBASIC2.9□□□□□ -1.95
SNX3O60493 C1DP2-201ENST00000418167 426 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC016907.1-201ENST00000419483 435 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 RPL31P35-201ENST00000431058 377 ntBASIC2.9□□□□□ -1.95
SNX3O60493 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX3O60493 AC091390.1-201ENST00000433904 331 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC073614.1-201ENST00000438690 650 ntBASIC2.9□□□□□ -1.95
SNX3O60493 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 AC013267.1-201ENST00000458227 267 ntBASIC2.9□□□□□ -1.95
SNX3O60493 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX3O60493 AL160314.1-201ENST00000490836 438 ntBASIC2.9□□□□□ -1.95
SNX3O60493 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SNX3O60493 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX3O60493 RNU7-51P-201ENST00000516560 62 ntBASIC2.9□□□□□ -1.95
SNX3O60493 DUXAP2-201ENST00000519198 589 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.9□□□□□ -1.95
SNX3O60493 ATP5F1P5-201ENST00000526403 760 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.9□□□□□ -1.95
SNX3O60493 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX3O60493 HMGB1P14-201ENST00000557424 591 ntBASIC2.9□□□□□ -1.95
SNX3O60493 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX3O60493 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.9□□□□□ -1.95
SNX3O60493 HMGB1P6-201ENST00000569046 646 ntBASIC2.9□□□□□ -1.95
SNX3O60493 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX3O60493 MIR3611-201ENST00000584484 83 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC006130.2-201ENST00000586202 326 ntBASIC2.9□□□□□ -1.95
SNX3O60493 VN1R85P-201ENST00000601587 426 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC136601.2-201ENST00000604356 474 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AP002360.4-201ENST00000606980 481 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC034102.8-201ENST00000615146 484 ntBASIC2.9□□□□□ -1.95
SNX3O60493 AC068831.8-201ENST00000620171 435 ntBASIC2.9□□□□□ -1.95
SNX3O60493 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX3O60493 MIR6810-201ENST00000622701 70 ntBASIC2.9□□□□□ -1.95
SNX3O60493 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX3O60493 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX3O60493 AL161912.2-201ENST00000565707 3007 ntBASIC2.9□□□□□ -1.95
SNX3O60493 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX3O60493 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX3O60493 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX3O60493 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX3O60493 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SNX3O60493 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNX3O60493 RNU6-169P-201ENST00000365336 107 ntBASIC2.89□□□□□ -1.95
SNX3O60493 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX3O60493 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.89□□□□□ -1.95
SNX3O60493 AL359837.1-201ENST00000381357 287 ntBASIC2.89□□□□□ -1.95
SNX3O60493 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
SNX3O60493 RNU6-1035P-201ENST00000384477 107 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX3O60493 ARPC3P1-201ENST00000437218 533 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX3O60493 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.89□□□□□ -1.95
SNX3O60493 MTCO2P18-201ENST00000457151 658 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AL031183.1-201ENST00000457667 207 ntBASIC2.89□□□□□ -1.95
SNX3O60493 KLF3P2-201ENST00000465138 268 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AC008571.1-201ENST00000467232 300 ntBASIC2.89□□□□□ -1.95
SNX3O60493 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX3O60493 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 RNA5SP290-201ENST00000517133 127 ntBASIC2.89□□□□□ -1.95
SNX3O60493 SNORA31.26-201ENST00000517250 137 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AP002963.1-201ENST00000530590 184 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AC012213.3-201ENST00000577199 777 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 MIR4697-201ENST00000582977 78 ntBASIC2.89□□□□□ -1.95
SNX3O60493 NRBF2P1-201ENST00000587407 859 ntBASIC2.89□□□□□ -1.95
SNX3O60493 GLUD1P4-201ENST00000590914 418 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 AC098826.3-201ENST00000603823 466 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AP000787.2-201ENST00000604432 568 ntBASIC2.89□□□□□ -1.95
SNX3O60493 AL136363.1-201ENST00000605349 337 ntBASIC2.89□□□□□ -1.95
SNX3O60493 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNX3O60493 AC008498.1-201ENST00000613012 531 ntBASIC2.89□□□□□ -1.95
SNX3O60493 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
SNX3O60493 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.89□□□□□ -1.95
SNX3O60493 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNX3O60493 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNX3O60493 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
SNX3O60493 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms