Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC013553.2-201ENST00000604244 589 ntBASIC1.02□□□□□ -2.25
SSSCA1O60232 AC090132.2-201ENST00000615881 347 ntBASIC1.02□□□□□ -2.25
SSSCA1O60232 AL109659.3-201ENST00000624985 950 ntBASIC1.02□□□□□ -2.25
SSSCA1O60232 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
SSSCA1O60232 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SSSCA1O60232 AL049641.1-201ENST00000441055 1948 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSSCA1O60232 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSSCA1O60232 RNU6-748P-201ENST00000384648 107 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 PAICSP7-201ENST00000419829 962 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.01□□□□□ -2.25
SSSCA1O60232 RPS15AP5-201ENST00000436276 388 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 UBE2V1P5-201ENST00000440070 405 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.01□□□□□ -2.25
SSSCA1O60232 MRPS17P3-201ENST00000465453 385 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 TRBV12-1-201ENST00000479785 344 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 RPS15AP36-201ENST00000492022 382 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 FAM206BP-201ENST00000510179 541 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.01□□□□□ -2.25
SSSCA1O60232 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.01□□□□□ -2.25
SSSCA1O60232 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.01□□□□□ -2.25
SSSCA1O60232 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.01□□□□□ -2.25
SSSCA1O60232 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.01□□□□□ -2.25
SSSCA1O60232 BNIP3P4-201ENST00000604946 565 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 RMST_6.1-201ENST00000611980 203 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AC008498.1-201ENST00000613012 531 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.01□□□□□ -2.25
SSSCA1O60232 AC006213.4-201ENST00000616184 634 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AC068722.2-201ENST00000618734 544 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 AC091953.2-201ENST00000623979 160 ntBASIC1.01□□□□□ -2.25
SSSCA1O60232 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SSSCA1O60232 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
SSSCA1O60232 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1□□□□□ -2.25
SSSCA1O60232 TAF9BP2-201ENST00000400856 499 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1□□□□□ -2.25
SSSCA1O60232 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1□□□□□ -2.25
SSSCA1O60232 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1□□□□□ -2.25
SSSCA1O60232 AL606490.8-201ENST00000441624 319 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1□□□□□ -2.25
SSSCA1O60232 MTCO1P48-201ENST00000448024 1096 ntBASIC1□□□□□ -2.25
SSSCA1O60232 RPS29P29-201ENST00000456396 171 ntBASIC1□□□□□ -2.25
SSSCA1O60232 snoU109.4-201ENST00000458953 143 ntBASIC1□□□□□ -2.25
SSSCA1O60232 SNORD13-201ENST00000459299 104 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC008379.1-201ENST00000463655 464 ntBASIC1□□□□□ -2.25
SSSCA1O60232 UBE2DNL-203ENST00000474922 222 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC004223.1-201ENST00000479840 271 ntBASIC1□□□□□ -2.25
SSSCA1O60232 HMGB1P35-201ENST00000503360 598 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC138853.1-201ENST00000503549 823 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 RNU6-27P-201ENST00000516146 107 ntBASIC1□□□□□ -2.25
SSSCA1O60232 RNA5SP137-201ENST00000516833 135 ntBASIC1□□□□□ -2.25
SSSCA1O60232 RNU1-92P-201ENST00000517017 135 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 NAP1L1P1-201ENST00000524793 1063 ntBASIC1□□□□□ -2.25
SSSCA1O60232 TRAV11-201ENST00000539512 339 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1□□□□□ -2.25
SSSCA1O60232 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1□□□□□ -2.25
SSSCA1O60232 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1□□□□□ -2.25
SSSCA1O60232 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1□□□□□ -2.25
SSSCA1O60232 AL031274.2-201ENST00000599419 203 ntBASIC1□□□□□ -2.25
SSSCA1O60232 DLEU1_1.1-201ENST00000618107 190 ntBASIC1□□□□□ -2.25
SSSCA1O60232 PISRT1-201ENST00000626175 531 ntBASIC1□□□□□ -2.25
SSSCA1O60232 Z99571.1-201ENST00000636677 394 ntBASIC1□□□□□ -2.25
SSSCA1O60232 AC087821.2-201ENST00000637086 450 ntBASIC1□□□□□ -2.25
SSSCA1O60232 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
SSSCA1O60232 ANKRD26P2-201ENST00000445530 1710 ntBASIC1□□□□□ -2.25
SSSCA1O60232 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1□□□□□ -2.25
SSSCA1O60232 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SSSCA1O60232 SNORD82-201ENST00000365530 70 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 SNORA70B-201ENST00000384210 135 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 RNU6-750P-201ENST00000390946 107 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 MTND5P25-201ENST00000430499 799 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.99□□□□□ -2.25
SSSCA1O60232 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.99□□□□□ -2.25
SSSCA1O60232 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
SSSCA1O60232 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.99□□□□□ -2.25
SSSCA1O60232 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.99□□□□□ -2.25
SSSCA1O60232 MIR3198-2-201ENST00000577868 80 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 AC105245.1-201ENST00000581934 244 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 AP001485.1-201ENST00000604799 199 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 FRG1HP-204ENST00000617940 757 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 MIR6852-201ENST00000621699 66 ntBASIC0.99□□□□□ -2.25
SSSCA1O60232 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SSSCA1O60232 AP005901.5-201ENST00000545779 1796 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 ZNF29P-201ENST00000225587 168 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 RNU6-338P-201ENST00000383888 105 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 RNA5SP212-201ENST00000391223 107 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SSSCA1O60232 AL590084.1-201ENST00000407885 387 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.98□□□□□ -2.25
SSSCA1O60232 VTA1P1-201ENST00000414044 866 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 OR51A5P-201ENST00000415429 942 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.98□□□□□ -2.25
SSSCA1O60232 AL049734.2-201ENST00000441066 616 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 DNAJC19P8-201ENST00000452887 259 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms