Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR3662-201ENST00000637030 95 ntBASIC3.42□□□□□ -1.86
LDB2O43679 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB2O43679 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB2O43679 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LDB2O43679 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB2O43679 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB2O43679 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB2O43679 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB2O43679 CASC19-280ENST00000642102 1351 ntBASIC3.41□□□□□ -1.86
LDB2O43679 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDB2O43679 RNU5E-6P-201ENST00000365574 115 ntBASIC3.41□□□□□ -1.86
LDB2O43679 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDB2O43679 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LDB2O43679 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
LDB2O43679 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
LDB2O43679 MIR454-201ENST00000390180 115 ntBASIC3.41□□□□□ -1.86
LDB2O43679 RNU2-39P-201ENST00000410604 198 ntBASIC3.41□□□□□ -1.86
LDB2O43679 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
LDB2O43679 RNU6-954P-201ENST00000411355 107 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC138393.2-201ENST00000414742 246 ntBASIC3.41□□□□□ -1.86
LDB2O43679 OR51A5P-201ENST00000415429 942 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB2O43679 PPP1R11P2-201ENST00000423543 382 ntBASIC3.41□□□□□ -1.86
LDB2O43679 RPL23AP83-201ENST00000434984 473 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC126389.1-201ENST00000477436 290 ntBASIC3.41□□□□□ -1.86
LDB2O43679 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
LDB2O43679 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AP001646.1-201ENST00000527936 915 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB2O43679 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB2O43679 AL161756.2-201ENST00000604597 246 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
LDB2O43679 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC092794.2-201ENST00000620933 563 ntBASIC3.41□□□□□ -1.86
LDB2O43679 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB2O43679 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB2O43679 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LDB2O43679 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB2O43679 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.86
LDB2O43679 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB2O43679 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LDB2O43679 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LDB2O43679 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDB2O43679 AC073343.1-201ENST00000328239 651 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RNU6-451P-201ENST00000362921 107 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RNU6-335P-201ENST00000364563 113 ntBASIC3.4□□□□□ -1.87
LDB2O43679 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB2O43679 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RNU6-876P-201ENST00000391295 104 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL591416.1-201ENST00000404015 867 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL359634.1-202ENST00000404721 284 ntBASIC3.4□□□□□ -1.87
LDB2O43679 HSPE1P26-201ENST00000405341 275 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC009237.5-201ENST00000414271 501 ntBASIC3.4□□□□□ -1.87
LDB2O43679 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RPL30P16-201ENST00000419341 429 ntBASIC3.4□□□□□ -1.87
LDB2O43679 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB2O43679 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB2O43679 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL159987.2-201ENST00000432754 307 ntBASIC3.4□□□□□ -1.87
LDB2O43679 MTATP6P16-201ENST00000434543 526 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RPL36AP6-201ENST00000435770 321 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.4□□□□□ -1.87
LDB2O43679 AC008264.1-201ENST00000447612 367 ntBASIC3.4□□□□□ -1.87
LDB2O43679 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB2O43679 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB2O43679 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB2O43679 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
LDB2O43679 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC233702.1-201ENST00000482905 502 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC116562.3-201ENST00000506136 177 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC117522.1-201ENST00000509821 380 ntBASIC3.4□□□□□ -1.87
LDB2O43679 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB2O43679 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB2O43679 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB2O43679 AC068587.5-201ENST00000528506 175 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC007458.1-201ENST00000542812 373 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.4□□□□□ -1.87
LDB2O43679 AC005476.1-201ENST00000554427 397 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC055876.1-202ENST00000567053 138 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB2O43679 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.4□□□□□ -1.87
LDB2O43679 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.4□□□□□ -1.87
LDB2O43679 AC006557.5-201ENST00000603126 811 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC012443.1-201ENST00000605605 231 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL357078.3-201ENST00000607528 618 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AL354950.2-201ENST00000617939 290 ntBASIC3.4□□□□□ -1.87
LDB2O43679 MIR7975-201ENST00000619350 68 ntBASIC3.4□□□□□ -1.87
LDB2O43679 U7.8-201ENST00000619968 63 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC024940.5-201ENST00000622889 474 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AP003122.6-201ENST00000623831 495 ntBASIC3.4□□□□□ -1.87
LDB2O43679 AC048347.1-201ENST00000624621 427 ntBASIC3.4□□□□□ -1.87
LDB2O43679 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
LDB2O43679 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB2O43679 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB2O43679 AC006020.1-201ENST00000420179 1854 ntBASIC3.39□□□□□ -1.87
LDB2O43679 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB2O43679 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms