Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.57□□□□□ -2
RIPK2O43353 MTND1P16-201ENST00000465177 898 ntBASIC2.57□□□□□ -2
RIPK2O43353 RPS15AP36-201ENST00000492022 382 ntBASIC2.57□□□□□ -2
RIPK2O43353 RPS27AP10-201ENST00000496103 208 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC026801.1-201ENST00000497178 464 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.57□□□□□ -2
RIPK2O43353 AC010587.2-201ENST00000511727 448 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC109445.1-201ENST00000512356 383 ntBASIC2.57□□□□□ -2
RIPK2O43353 MTND5P13-201ENST00000513046 1079 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
RIPK2O43353 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.57□□□□□ -2
RIPK2O43353 AC243972.3-201ENST00000539655 198 ntBASIC2.57□□□□□ -2
RIPK2O43353 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIPK2O43353 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.57□□□□□ -2
RIPK2O43353 AC023050.2-201ENST00000544968 387 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC022022.2-201ENST00000602989 360 ntBASIC2.57□□□□□ -2
RIPK2O43353 AL391813.1-201ENST00000603098 260 ntBASIC2.57□□□□□ -2
RIPK2O43353 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC012468.1-201ENST00000604888 430 ntBASIC2.57□□□□□ -2
RIPK2O43353 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.57□□□□□ -2
RIPK2O43353 AC005332.10-201ENST00000612725 619 ntBASIC2.57□□□□□ -2
RIPK2O43353 AP000484.1-201ENST00000620067 1252 ntBASIC2.57□□□□□ -2
RIPK2O43353 MIR3199-2-201ENST00000636243 86 ntBASIC2.57□□□□□ -2
RIPK2O43353 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
RIPK2O43353 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.56□□□□□ -2
RIPK2O43353 RPL26P27-201ENST00000414397 437 ntBASIC2.56□□□□□ -2
RIPK2O43353 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 AL389915.1-201ENST00000422463 466 ntBASIC2.56□□□□□ -2
RIPK2O43353 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.56□□□□□ -2
RIPK2O43353 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 AC007560.1-201ENST00000426912 237 ntBASIC2.56□□□□□ -2
RIPK2O43353 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.56□□□□□ -2
RIPK2O43353 AL135938.1-201ENST00000443141 297 ntBASIC2.56□□□□□ -2
RIPK2O43353 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.56□□□□□ -2
RIPK2O43353 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.56□□□□□ -2
RIPK2O43353 USP9YP10-201ENST00000454868 628 ntBASIC2.56□□□□□ -2
RIPK2O43353 BX510359.1-201ENST00000456973 237 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.56□□□□□ -2
RIPK2O43353 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
RIPK2O43353 RN7SKP287-201ENST00000516546 266 ntBASIC2.56□□□□□ -2
RIPK2O43353 Y_RNA.717-201ENST00000517106 92 ntBASIC2.56□□□□□ -2
RIPK2O43353 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.56□□□□□ -2
RIPK2O43353 MRPS36P5-201ENST00000551909 298 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC009097.3-201ENST00000563557 1018 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 AC025588.2-201ENST00000604851 466 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC093424.1-201ENST00000604999 338 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC004805.2-201ENST00000605382 482 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC063944.3-201ENST00000609969 533 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC097478.2-201ENST00000610572 514 ntBASIC2.56□□□□□ -2
RIPK2O43353 AC245884.12-201ENST00000615364 59 ntBASIC2.56□□□□□ -2
RIPK2O43353 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.56□□□□□ -2
RIPK2O43353 CU459211.1-201ENST00000635667 749 ntBASIC2.56□□□□□ -2
RIPK2O43353 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
RIPK2O43353 MTND5P1-201ENST00000445440 1375 ntBASIC2.56□□□□□ -2
RIPK2O43353 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RIPK2O43353 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RIPK2O43353 FAM133CP-201ENST00000332869 704 ntBASIC2.55□□□□□ -2
RIPK2O43353 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.55□□□□□ -2
RIPK2O43353 SNORA71.3-201ENST00000362582 128 ntBASIC2.55□□□□□ -2
RIPK2O43353 SNORD113-6-201ENST00000363345 75 ntBASIC2.55□□□□□ -2
RIPK2O43353 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.55□□□□□ -2
RIPK2O43353 RNU6-157P-201ENST00000383957 107 ntBASIC2.55□□□□□ -2
RIPK2O43353 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
RIPK2O43353 RSL24D1P4-201ENST00000400938 484 ntBASIC2.55□□□□□ -2
RIPK2O43353 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.55□□□□□ -2
RIPK2O43353 RNU6-757P-201ENST00000410334 100 ntBASIC2.55□□□□□ -2
RIPK2O43353 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.55□□□□□ -2
RIPK2O43353 USP9YP26-201ENST00000421008 661 ntBASIC2.55□□□□□ -2
RIPK2O43353 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.55□□□□□ -2
RIPK2O43353 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.55□□□□□ -2
RIPK2O43353 YME1L1P1-201ENST00000429435 297 ntBASIC2.55□□□□□ -2
RIPK2O43353 MTND1P32-201ENST00000433043 938 ntBASIC2.55□□□□□ -2
RIPK2O43353 RPS25P9-201ENST00000435591 252 ntBASIC2.55□□□□□ -2
RIPK2O43353 MTND3P1-201ENST00000441336 220 ntBASIC2.55□□□□□ -2
RIPK2O43353 MTND5P30-201ENST00000452896 1731 ntBASIC2.55□□□□□ -2
RIPK2O43353 AC008481.1-201ENST00000463278 396 ntBASIC2.55□□□□□ -2
RIPK2O43353 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.55□□□□□ -2
RIPK2O43353 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.55□□□□□ -2
RIPK2O43353 AC034244.1-201ENST00000507687 207 ntBASIC2.55□□□□□ -2
RIPK2O43353 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
RIPK2O43353 RNU5A-4P-201ENST00000516588 111 ntBASIC2.55□□□□□ -2
RIPK2O43353 SNORD19.2-201ENST00000516978 73 ntBASIC2.55□□□□□ -2
RIPK2O43353 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.55□□□□□ -2
RIPK2O43353 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.55□□□□□ -2
RIPK2O43353 AC023538.1-201ENST00000534576 736 ntBASIC2.55□□□□□ -2
RIPK2O43353 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.55□□□□□ -2
RIPK2O43353 DUXAP1-201ENST00000556632 463 ntBASIC2.55□□□□□ -2
RIPK2O43353 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.55□□□□□ -2
RIPK2O43353 MIR5571-201ENST00000577998 113 ntBASIC2.55□□□□□ -2
RIPK2O43353 AL158042.1-201ENST00000605338 460 ntBASIC2.55□□□□□ -2
RIPK2O43353 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.55□□□□□ -2
RIPK2O43353 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.55□□□□□ -2
RIPK2O43353 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.55□□□□□ -2
RIPK2O43353 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.55□□□□□ -2
RIPK2O43353 U2.21-201ENST00000637295 81 ntBASIC2.55□□□□□ -2
RIPK2O43353 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms