Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
MSI1O43347 AC078817.1-201ENST00000492623 435 ntBASIC3.56□□□□□ -1.84
MSI1O43347 FCF1P3-201ENST00000496394 590 ntBASIC3.56□□□□□ -1.84
MSI1O43347 AC074250.1-201ENST00000511117 192 ntBASIC3.56□□□□□ -1.84
MSI1O43347 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.56□□□□□ -1.84
MSI1O43347 AC118273.2-201ENST00000532092 465 ntBASIC3.56□□□□□ -1.84
MSI1O43347 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.56□□□□□ -1.84
MSI1O43347 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.56□□□□□ -1.84
MSI1O43347 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
MSI1O43347 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.56□□□□□ -1.84
MSI1O43347 AL020991.1-201ENST00000612314 373 ntBASIC3.56□□□□□ -1.84
MSI1O43347 YWHAEP7-203ENST00000622054 312 ntBASIC3.56□□□□□ -1.84
MSI1O43347 DUXAP9-208ENST00000622815 614 ntBASIC3.56□□□□□ -1.84
MSI1O43347 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
MSI1O43347 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSI1O43347 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MSI1O43347 AC073346.2-201ENST00000624724 2058 ntBASIC3.56□□□□□ -1.84
MSI1O43347 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSI1O43347 AC004925.1-201ENST00000624256 2706 ntBASIC3.56□□□□□ -1.84
MSI1O43347 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
MSI1O43347 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSI1O43347 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
MSI1O43347 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 RNY3P3-201ENST00000363816 102 ntBASIC3.55□□□□□ -1.84
MSI1O43347 RNU6-641P-201ENST00000384006 107 ntBASIC3.55□□□□□ -1.84
MSI1O43347 MIR454-201ENST00000390180 115 ntBASIC3.55□□□□□ -1.84
MSI1O43347 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
MSI1O43347 OR51A5P-201ENST00000415429 942 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC024082.2-201ENST00000434771 238 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.55□□□□□ -1.84
MSI1O43347 AL356010.1-201ENST00000456364 102 ntBASIC3.55□□□□□ -1.84
MSI1O43347 RNU7-63P-201ENST00000459054 62 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC126389.1-201ENST00000477436 290 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC093663.1-201ENST00000497190 394 ntBASIC3.55□□□□□ -1.84
MSI1O43347 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.55□□□□□ -1.84
MSI1O43347 KLHL2P1-201ENST00000508691 521 ntBASIC3.55□□□□□ -1.84
MSI1O43347 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC074344.1-201ENST00000512823 224 ntBASIC3.55□□□□□ -1.84
MSI1O43347 RNU6-1092P-201ENST00000516955 87 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 OR5BN1P-201ENST00000532955 829 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.55□□□□□ -1.84
MSI1O43347 FAM60BP-201ENST00000578364 658 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC024619.4-201ENST00000580924 316 ntBASIC3.55□□□□□ -1.84
MSI1O43347 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.55□□□□□ -1.84
MSI1O43347 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
MSI1O43347 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.55□□□□□ -1.84
MSI1O43347 AL035413.2-201ENST00000604801 525 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AC096577.2-201ENST00000611455 153 ntBASIC3.55□□□□□ -1.84
MSI1O43347 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.55□□□□□ -1.84
MSI1O43347 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.55□□□□□ -1.84
MSI1O43347 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MSI1O43347 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.55□□□□□ -1.84
MSI1O43347 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSI1O43347 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSI1O43347 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.54□□□□□ -1.84
MSI1O43347 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSI1O43347 AC006020.1-201ENST00000420179 1854 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
MSI1O43347 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
MSI1O43347 RNU6-451P-201ENST00000362921 107 ntBASIC3.54□□□□□ -1.84
MSI1O43347 RNU6-877P-201ENST00000383868 107 ntBASIC3.54□□□□□ -1.84
MSI1O43347 MIR34B-201ENST00000385076 84 ntBASIC3.54□□□□□ -1.84
MSI1O43347 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MSI1O43347 EI24P1-201ENST00000416584 867 ntBASIC3.54□□□□□ -1.84
MSI1O43347 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.54□□□□□ -1.84
MSI1O43347 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.54□□□□□ -1.84
MSI1O43347 MTCO3P18-201ENST00000440206 761 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.54□□□□□ -1.84
MSI1O43347 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.54□□□□□ -1.84
MSI1O43347 MRPS31P2-201ENST00000451581 518 ntBASIC3.54□□□□□ -1.84
MSI1O43347 SNRPGP5-201ENST00000456003 220 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.54□□□□□ -1.84
MSI1O43347 SNORD97-201ENST00000459187 142 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AP000873.1-201ENST00000463987 400 ntBASIC3.54□□□□□ -1.84
MSI1O43347 MRPS17P3-201ENST00000465453 385 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC006512.1-201ENST00000468816 291 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC078918.1-201ENST00000498515 228 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC116562.3-201ENST00000506136 177 ntBASIC3.54□□□□□ -1.84
MSI1O43347 RNU6-358P-201ENST00000516564 75 ntBASIC3.54□□□□□ -1.84
MSI1O43347 RN7SKP60-201ENST00000516985 239 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.54□□□□□ -1.84
MSI1O43347 AC068587.5-201ENST00000528506 175 ntBASIC3.54□□□□□ -1.84
MSI1O43347 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
MSI1O43347 AC005476.1-201ENST00000554427 397 ntBASIC3.54□□□□□ -1.84
MSI1O43347 OR4H12P-201ENST00000556269 907 ntBASIC3.54□□□□□ -1.84
MSI1O43347 NCAPGP2-201ENST00000557911 754 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC005951.2-201ENST00000576282 495 ntBASIC3.54□□□□□ -1.84
MSI1O43347 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.54□□□□□ -1.84
MSI1O43347 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.54□□□□□ -1.84
MSI1O43347 BNIP3P30-201ENST00000601184 574 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms