Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU6-964P-201ENST00000516524 69 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.93□□□□□ -2.26
CACNA1AO00555 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.93□□□□□ -2.26
CACNA1AO00555 AC083899.3-201ENST00000603413 594 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CACNA1AO00555 Y_RNA.375-201ENST00000365625 101 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 RNU6-178P-201ENST00000384631 104 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 AL590233.1-201ENST00000430017 456 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.93□□□□□ -2.26
CACNA1AO00555 RNU6-1334P-201ENST00000516032 105 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.93□□□□□ -2.26
CACNA1AO00555 LSM6P2-201ENST00000552208 177 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 ACTR3BP3-201ENST00000565577 979 ntBASIC0.93□□□□□ -2.26
CACNA1AO00555 RPL30P4-201ENST00000429309 333 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.92□□□□□ -2.26
CACNA1AO00555 GDI2P2-201ENST00000445131 608 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 SNORD121B-201ENST00000458838 81 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.92□□□□□ -2.26
CACNA1AO00555 MIR4446-201ENST00000578505 67 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AC023932.2-201ENST00000603176 175 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AC112503.2-201ENST00000609005 552 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 MIR144-201ENST00000384886 86 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.92□□□□□ -2.26
CACNA1AO00555 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.92□□□□□ -2.26
CACNA1AO00555 HSPE1P20-201ENST00000538133 289 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.92□□□□□ -2.26
CACNA1AO00555 AC133485.1-201ENST00000567176 124 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AC138907.6-201ENST00000568401 126 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 AC145207.9-201ENST00000623802 325 ntBASIC0.92□□□□□ -2.26
CACNA1AO00555 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
CACNA1AO00555 SUMO2P12-201ENST00000405924 140 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 COX6CP18-201ENST00000448769 222 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 MTCYBP35-201ENST00000503630 1137 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC112198.4-201ENST00000515450 351 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.91□□□□□ -2.26
CACNA1AO00555 AP004247.1-201ENST00000531556 1289 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 SETP2-201ENST00000553886 926 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC073569.3-201ENST00000619055 682 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.91□□□□□ -2.26
CACNA1AO00555 AC011155.1-201ENST00000316512 456 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 RNA5SP295-201ENST00000362655 121 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.91□□□□□ -2.26
CACNA1AO00555 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.91□□□□□ -2.26
CACNA1AO00555 AC073614.1-201ENST00000438690 650 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 C1DP3-201ENST00000455013 423 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.91□□□□□ -2.26
CACNA1AO00555 AC079148.1-201ENST00000565944 819 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 RNU6-84P-201ENST00000607737 102 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 AC099654.7-201ENST00000635788 2127 ntBASIC0.91□□□□□ -2.26
CACNA1AO00555 HSFY3P-201ENST00000444242 1191 ntBASIC0.9□□□□□ -2.26
CACNA1AO00555 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.9□□□□□ -2.26
CACNA1AO00555 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.9□□□□□ -2.26
CACNA1AO00555 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CACNA1AO00555 RNU4-32P-201ENST00000363404 141 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 RNU1-52P-201ENST00000384190 164 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 HSPE1P26-201ENST00000405341 275 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.9□□□□□ -2.27
CACNA1AO00555 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.9□□□□□ -2.27
CACNA1AO00555 AC092832.1-201ENST00000422934 400 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.9□□□□□ -2.27
CACNA1AO00555 MTND4LP12-201ENST00000448237 295 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 AC007115.1-201ENST00000546853 234 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 AC011468.4-201ENST00000603942 409 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 MIR4278-201ENST00000636094 69 ntBASIC0.9□□□□□ -2.27
CACNA1AO00555 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.89□□□□□ -2.27
CACNA1AO00555 MIR365A-201ENST00000362260 87 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 RNU4-52P-201ENST00000384209 138 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 MTND1P23-201ENST00000416931 372 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 PTP4A1P1-201ENST00000420539 515 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 ISCA1P1-201ENST00000426679 387 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 AL353689.1-201ENST00000438895 199 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.89□□□□□ -2.27
CACNA1AO00555 AC022431.1-201ENST00000450941 438 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.89□□□□□ -2.27
CACNA1AO00555 AC005912.1-201ENST00000495392 255 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 RNA5SP364-201ENST00000516938 78 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.89□□□□□ -2.27
CACNA1AO00555 MIR378F-201ENST00000578143 78 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 XKRY2-202ENST00000623874 1581 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 XKRY-202ENST00000624960 1581 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CACNA1AO00555 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.89□□□□□ -2.27
CACNA1AO00555 Y_RNA.28-201ENST00000362554 111 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 Y_RNA.410-201ENST00000383992 113 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 RNU6-1181P-201ENST00000384191 106 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 CCNB2P1-201ENST00000399411 1150 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 HMGB1P17-201ENST00000403495 628 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CACNA1AO00555 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.89□□□□□ -2.27
CACNA1AO00555 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.89□□□□□ -2.27
CACNA1AO00555 SNORD116-26-201ENST00000516006 96 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 AC243829.6-201ENST00000612652 106 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 AC130454.1-201ENST00000622948 401 ntBASIC0.89□□□□□ -2.27
CACNA1AO00555 MFSD8-213ENST00000641134 1327 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 RNU1-109P-201ENST00000383960 147 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 AL121601.2-201ENST00000438019 707 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CACNA1AO00555 DEFB108E-201ENST00000524692 240 ntBASIC0.88□□□□□ -2.27
CACNA1AO00555 MIR4514-201ENST00000581410 57 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms