Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR4R1P-201ENST00000529879 463 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC145350.1-201ENST00000567426 208 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AP000403.1-201ENST00000603349 851 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AL360219.1-201ENST00000610230 366 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC004852.3-201ENST00000614131 326 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 AC068880.5-201ENST00000624331 290 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDLIM1O00151 AC007785.2-201ENST00000598627 1916 ntBASIC2.68□□□□□ -1.98
PDLIM1O00151 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PDLIM1O00151 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM1O00151 ZNF833P-201ENST00000424938 1494 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU1-105P-201ENST00000363470 161 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU6-198P-201ENST00000384258 104 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RPS20P2-201ENST00000402520 389 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AL138885.1-201ENST00000405921 675 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU4-72P-201ENST00000410754 173 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU6-920P-201ENST00000410926 92 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 USP9YP27-201ENST00000418455 438 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC093156.1-201ENST00000440382 670 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM1O00151 ART2BP-201ENST00000453501 499 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AC108059.3-201ENST00000456388 214 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM1O00151 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU6-420P-201ENST00000458780 107 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 snoU13.28-201ENST00000459235 104 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC117440.1-201ENST00000474107 571 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC010631.1-201ENST00000474150 156 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RPL30P6-201ENST00000475925 342 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU6-759P-201ENST00000516740 103 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RN7SKP272-201ENST00000516988 232 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 RNA5SP291-201ENST00000517222 105 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 NRON-201ENST00000517270 370 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AP002748.2-201ENST00000528671 348 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AC093012.1-202ENST00000549403 582 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC091489.2-201ENST00000566263 604 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AC005000.2-201ENST00000605468 310 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM1O00151 MIR6895-201ENST00000613497 78 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AF246928.1-201ENST00000623768 87 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AC079248.2-201ENST00000623779 326 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 AL136313.1-201ENST00000624804 202 ntBASIC2.67□□□□□ -1.98
PDLIM1O00151 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM1O00151 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM1O00151 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM1O00151 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PDLIM1O00151 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AL049641.1-201ENST00000441055 1948 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM1O00151 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM1O00151 RNU5A-8P-201ENST00000364102 114 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 SNORA71.1-201ENST00000364523 117 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 RNU5A-2P-201ENST00000384337 116 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 MTND1P23-201ENST00000416931 372 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AL451054.2-201ENST00000420896 202 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM1O00151 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM1O00151 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 PIGFP3-201ENST00000441918 722 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC118469.1-201ENST00000442943 488 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC011825.1-201ENST00000484967 388 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC005178.1-201ENST00000508392 440 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC114797.1-201ENST00000514003 728 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 SNORA9.3-201ENST00000516383 129 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 RNU6-1282P-201ENST00000516735 96 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 RNU6-1003P-201ENST00000517099 105 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 RNU6-64P-201ENST00000517119 105 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 SNORA31.21-201ENST00000517180 77 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms