Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC188H7C350 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC188H7C350 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC188H7C350 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 RNU2-36P-201ENST00000410361 191 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC188H7C350 ELOCP4-201ENST00000420090 333 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AL353678.1-201ENST00000422735 741 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 HMGN2P30-201ENST00000423237 256 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC097713.2-201ENST00000430199 356 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 GPM6BP2-201ENST00000432046 144 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC188H7C350 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 GPM6BP1-201ENST00000446387 144 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 PRDX3P3-201ENST00000447765 522 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 SNRPFP4-201ENST00000456366 242 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 MTND3P7-201ENST00000474435 343 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC188H7C350 RN7SL293P-201ENST00000481765 281 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC109486.1-201ENST00000486833 374 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC188H7C350 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC188H7C350 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC188H7C350 RNU2-10P-201ENST00000516375 211 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC007834.2-201ENST00000536310 343 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC008088.1-201ENST00000580993 280 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 BNIP3P8-201ENST00000597863 560 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC015871.2-201ENST00000603605 948 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC098826.3-201ENST00000603823 466 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC136601.2-201ENST00000604356 474 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC188H7C350 AC009878.1-201ENST00000621819 340 ntBASIC3.01□□□□□ -1.93
CCDC188H7C350 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC188H7C350 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC188H7C350 MTND4P4-201ENST00000439033 1366 ntBASIC3□□□□□ -1.93
CCDC188H7C350 RNU6-884P-201ENST00000363889 107 ntBASIC3□□□□□ -1.93
CCDC188H7C350 RNU6-512P-201ENST00000364438 103 ntBASIC3□□□□□ -1.93
CCDC188H7C350 SNORA54-201ENST00000384281 123 ntBASIC3□□□□□ -1.93
CCDC188H7C350 SNORD115.1-201ENST00000391109 76 ntBASIC3□□□□□ -1.93
CCDC188H7C350 SNORA26.8-201ENST00000391306 124 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3□□□□□ -1.93
CCDC188H7C350 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
CCDC188H7C350 B3GALNT1P1-201ENST00000420569 975 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 AC137499.1-201ENST00000427602 88 ntBASIC3□□□□□ -1.93
CCDC188H7C350 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
CCDC188H7C350 RPL36AP53-201ENST00000432891 316 ntBASIC3□□□□□ -1.93
CCDC188H7C350 SNRPEP9-201ENST00000436794 238 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AL445567.1-201ENST00000439121 144 ntBASIC3□□□□□ -1.93
CCDC188H7C350 MTND1P26-201ENST00000440488 538 ntBASIC3□□□□□ -1.93
CCDC188H7C350 COX6CP2-201ENST00000444980 225 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 MTND1P12-201ENST00000455231 147 ntBASIC3□□□□□ -1.93
CCDC188H7C350 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3□□□□□ -1.93
CCDC188H7C350 RNU7-23P-201ENST00000459465 62 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC116337.2-201ENST00000477662 156 ntBASIC3□□□□□ -1.93
CCDC188H7C350 RPS27AP9-201ENST00000477681 438 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC068724.1-201ENST00000487100 792 ntBASIC3□□□□□ -1.93
CCDC188H7C350 ARL4AP2-201ENST00000507378 601 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 AC074250.1-201ENST00000511117 192 ntBASIC3□□□□□ -1.93
CCDC188H7C350 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 RNU7-51P-201ENST00000516560 62 ntBASIC3□□□□□ -1.93
CCDC188H7C350 RNA5SP471-201ENST00000516971 106 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 ELOCP31-201ENST00000540463 467 ntBASIC3□□□□□ -1.93
CCDC188H7C350 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 ARL2BPP2-201ENST00000550907 489 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 MIR3605-201ENST00000583214 100 ntBASIC3□□□□□ -1.93
CCDC188H7C350 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3□□□□□ -1.93
CCDC188H7C350 AC012065.4-201ENST00000602445 679 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3□□□□□ -1.93
CCDC188H7C350 AC004805.2-201ENST00000605382 482 ntBASIC3□□□□□ -1.93
CCDC188H7C350 FTX_3.1-201ENST00000610451 147 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC008250.2-201ENST00000615261 205 ntBASIC3□□□□□ -1.93
CCDC188H7C350 AC025048.6-202ENST00000627667 438 ntBASIC3□□□□□ -1.93
CCDC188H7C350 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC188H7C350 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
CCDC188H7C350 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3□□□□□ -1.93
CCDC188H7C350 AC091564.4-201ENST00000533934 2194 ntBASIC3□□□□□ -1.93
CCDC188H7C350 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms