Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 UBE2FP1-201ENST00000416536 447 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 HSPE1P1-201ENST00000421494 318 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL356583.2-201ENST00000426536 280 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 TIMM9P1-201ENST00000436122 256 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AP000936.2-201ENST00000447151 681 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL590365.1-201ENST00000450788 243 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL590639.1-201ENST00000456484 337 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC126389.1-201ENST00000477436 290 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 RPL23AP41-201ENST00000484754 458 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC112204.1-201ENST00000502591 103 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 HMGN1P28-201ENST00000521340 364 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR3118-1-201ENST00000581787 76 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR548AB-201ENST00000584917 84 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC110760.3-201ENST00000598794 467 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC090115.4-201ENST00000609970 188 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC069234.5-201ENST00000611056 416 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC245517.5-201ENST00000611529 162 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AL020991.1-201ENST00000612314 373 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010338.1-201ENST00000621823 717 ntBASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NEDD8-MDP1E9PL57 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC008568.2-201ENST00000623862 2313 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 SDAD1P2-201ENST00000441308 2028 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 OR4G2P-202ENST00000641004 1759 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC008850.1-201ENST00000427546 362 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 NDUFB4P6-201ENST00000436819 366 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC005094.1-201ENST00000440420 368 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 MTCO3P45-201ENST00000443036 613 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 MTND2P4-201ENST00000445034 1004 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU7-59P-201ENST00000459101 61 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AL049714.1-201ENST00000466686 347 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AL049874.1-201ENST00000489560 388 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 FABP5P5-201ENST00000515537 406 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 SCARNA15.2-201ENST00000516409 127 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 NRON-201ENST00000517270 370 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC022616.6-201ENST00000520479 119 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC107934.1-201ENST00000522215 217 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 CASP1P1-201ENST00000526345 212 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC022690.1-201ENST00000526681 550 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AP002748.2-201ENST00000528671 348 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR3146-201ENST00000580367 79 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR4293-201ENST00000584305 78 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC013553.2-201ENST00000604244 589 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC013476.2-201ENST00000614456 459 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 AC009878.1-201ENST00000621819 340 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 CU459211.1-201ENST00000635667 749 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 IGHVIII-44-202ENST00000636235 289 ntBASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD8-MDP1E9PL57 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RPL9P7-201ENST00000330965 580 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU5A-8P-201ENST00000364102 114 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RPL17P12-201ENST00000413391 526 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC244035.1-201ENST00000430042 390 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 COX6CP2-201ENST00000444980 225 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RNA5SP310-201ENST00000459084 116 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010631.1-201ENST00000474150 156 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms