Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 Y_RNA.461-201ENST00000384263 103 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 MIR514A1-201ENST00000385133 98 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 MIR134-201ENST00000385258 73 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 OR4C10P-201ENST00000434991 931 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 CHEK2P4-201ENST00000450340 246 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 RNU6-1037P-201ENST00000459571 107 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 PARP4P3-201ENST00000510265 317 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 IGHV3-76-201ENST00000522465 295 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 TRAV37-201ENST00000553906 342 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 AP000787.2-201ENST00000604432 568 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 AC123912.5-201ENST00000605470 343 ntBASIC5.48□□□□□ -1.53
USP17L4A6NCW7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.48□□□□□ -1.53
USP17L4A6NCW7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 OR4G2P-202ENST00000641004 1759 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL445487.1-201ENST00000415694 1580 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 Y_RNA.447-201ENST00000384184 113 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 Y_RNA.552-201ENST00000384665 112 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL591034.2-201ENST00000402839 359 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 PGBD4P6-201ENST00000421501 610 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 CKS1BP6-201ENST00000424932 240 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AC079780.1-201ENST00000428259 207 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 RPS3AP12-201ENST00000443616 753 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AC110792.1-201ENST00000491826 472 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 HMGN1P11-201ENST00000508668 303 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 RNU6-1143P-201ENST00000516125 104 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AC144568.1-201ENST00000520139 137 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 CPDP1-201ENST00000579660 283 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 VN1R91P-201ENST00000594377 169 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AC078899.3-201ENST00000599065 212 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL161798.1-201ENST00000604630 131 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 AL121917.1-203ENST00000605534 577 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 HMGB1P50-201ENST00000605814 607 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 MIR3976-201ENST00000606807 139 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 U6.104-201ENST00000637979 90 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 MIR492-201ENST00000638676 116 ntBASIC5.47□□□□□ -1.53
USP17L4A6NCW7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
USP17L4A6NCW7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC005005.4-201ENST00000623789 16698 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RNU1-94P-201ENST00000362627 173 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 Y_RNA.551-201ENST00000384661 102 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RNA5SP317-201ENST00000410176 116 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RNA5SP311-201ENST00000411290 116 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RPS3AP46-201ENST00000448352 682 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AL591623.2-201ENST00000449978 222 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC133134.1-201ENST00000466800 359 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 FO393415.2-201ENST00000480085 343 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RNA5SP315-201ENST00000516340 116 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RNA5SP312-201ENST00000517068 116 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AP004371.1-201ENST00000525240 214 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC004584.2-201ENST00000570407 410 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC125232.2-201ENST00000592457 143 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 MTND4LP5-201ENST00000605152 292 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 AC004925.1-201ENST00000624256 2706 ntBASIC5.46□□□□□ -1.54
USP17L4A6NCW7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP17L4A6NCW7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 AL022322.2-201ENST00000624072 20397 ntBASIC5.45□□□□□ -1.54
USP17L4A6NCW7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 ZNF72P-201ENST00000425869 1908 ntBASIC5.45□□□□□ -1.54
USP17L4A6NCW7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP17L4A6NCW7 DEFB108F-201ENST00000344638 222 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms