Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPS26P21-201ENST00000475397 348 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC072039.1-201ENST00000477611 581 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AP001004.1-201ENST00000582468 324 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 MIR4307-201ENST00000582802 84 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC004223.4-201ENST00000612426 332 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC019226.1-201ENST00000625666 515 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AL138713.1-201ENST00000624026 2130 ntBASIC2.56□□□□□ -2
SMIM28A0A1B0GU29 AC004944.1-201ENST00000517807 3059 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RNU6-500P-201ENST00000362349 107 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 MIR325-201ENST00000385260 98 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 U8.14-201ENST00000390843 143 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC078974.1-201ENST00000411597 223 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RPL23AP39-201ENST00000415533 405 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC018630.2-202ENST00000422992 927 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 MTND1P9-201ENST00000453775 944 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RPS29P12-201ENST00000460178 152 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 LARP1BP2-201ENST00000486594 519 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 LINC00888-204ENST00000487386 421 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RNU1-41P-201ENST00000516161 162 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RNU1-48P-201ENST00000516400 162 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 SCARNA15.2-201ENST00000516409 127 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 SNORA31.26-201ENST00000517250 137 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 MTATP6P15-201ENST00000527233 835 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AL133153.1-201ENST00000557756 303 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 GLUD1P4-201ENST00000590914 418 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AL391813.2-201ENST00000609113 322 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AL355472.4-201ENST00000610233 626 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 TUG1_2.1-201ENST00000614234 87 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC027309.3-201ENST00000623419 351 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
SMIM28A0A1B0GU29 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 RNU6-754P-201ENST00000391166 107 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 UBE2FP1-201ENST00000416536 447 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC008850.1-201ENST00000427546 362 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 UBE2V1P13-201ENST00000436983 439 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AL031183.1-201ENST00000457667 207 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC055855.1-201ENST00000489563 579 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AP000403.1-201ENST00000603349 851 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AC108747.1-201ENST00000609508 535 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AL360219.1-201ENST00000610230 366 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AP000676.3-201ENST00000623299 569 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 AL159972.1-201ENST00000625150 448 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 SDAD1P2-201ENST00000441308 2028 ntBASIC2.54□□□□□ -2
SMIM28A0A1B0GU29 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.53□□□□□ -2
SMIM28A0A1B0GU29 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms