Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC005297.2-201ENST00000450430 606 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC007182.2-201ENST00000489251 402 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010468.3-201ENST00000508225 458 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 ZNF971P-201ENST00000562068 1249 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC022662.1-201ENST00000580252 331 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AP000403.1-201ENST00000603349 851 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 MTND1P37-201ENST00000636562 264 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR219B-201ENST00000637023 88 ntBASIC1.39□□□□□ -2.19
TRAV1-1A0A0B4J248 HSPA8P4-201ENST00000511877 1920 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 OR5T3-201ENST00000303059 1023 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 UBE2V1P15-201ENST00000407776 448 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 TAF13P2-201ENST00000416876 286 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC003685.2-201ENST00000422795 395 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AL121882.1-201ENST00000422893 417 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 USP9YP15-201ENST00000442391 422 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 GXYLT1P1-201ENST00000446657 490 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC080013.2-201ENST00000460866 323 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC079203.1-201ENST00000487972 404 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC068781.1-201ENST00000488231 618 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC010460.2-201ENST00000509054 677 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC125611.1-201ENST00000549563 229 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC091544.4-201ENST00000555268 342 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AL359212.1-201ENST00000556608 614 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC104581.2-201ENST00000572227 430 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC124283.4-201ENST00000581815 456 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 RPP40P2-201ENST00000603596 712 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 RPAP2P1-201ENST00000603626 1168 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC025588.2-201ENST00000604851 466 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC013476.2-201ENST00000614456 459 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AP003400.5-201ENST00000624827 617 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 AC008555.8-201ENST00000623602 2168 ntBASIC1.38□□□□□ -2.19
TRAV1-1A0A0B4J248 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU5E-8P-201ENST00000363502 116 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU6-140P-201ENST00000384566 108 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U8.14-201ENST00000390843 143 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU2-33P-201ENST00000410344 192 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU2-2P-201ENST00000410396 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RNU2-49P-201ENST00000410666 184 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 POLHP1-201ENST00000411806 470 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 CYCSP48-201ENST00000417124 323 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 BPY2DP-201ENST00000422208 265 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL445685.2-201ENST00000422551 342 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 ZNF863P-201ENST00000426746 417 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MTCYBP32-201ENST00000427945 1084 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL500527.1-201ENST00000448532 255 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 RPL7P55-201ENST00000450522 746 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MTND2P3-201ENST00000452458 470 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC026410.2-201ENST00000460281 156 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC055731.1-201ENST00000474387 401 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 LTV1P1-201ENST00000510683 1237 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC091965.2-201ENST00000512324 613 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 SNORA31.6-201ENST00000516241 130 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 SCARNA3-201ENST00000517097 143 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 SNORA31.25-201ENST00000517242 134 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 MIR1273D-201ENST00000577266 86 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.15-201ENST00000611544 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.16-201ENST00000613119 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.12-201ENST00000613778 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.20-201ENST00000613956 192 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC020658.4-201ENST00000613987 684 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AL118556.2-201ENST00000614375 824 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.9-201ENST00000615427 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 AC005296.1-201ENST00000616145 209 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.11-201ENST00000616345 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.2-201ENST00000616535 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.3-201ENST00000617785 191 ntBASIC1.37□□□□□ -2.19
TRAV1-1A0A0B4J248 U2.19-201ENST00000618602 191 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms