Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AL596245.1-201ENST00000618994 362 ntBASIC1.41□□□□□ -2.18
TRAV3A0A0B4J244 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV3A0A0B4J244 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
TRAV3A0A0B4J244 OR4G2P-202ENST00000641004 1759 ntBASIC1.41□□□□□ -2.18
TRAV3A0A0B4J244 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-353P-201ENST00000364266 108 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR506-201ENST00000384998 124 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR676-201ENST00000390702 67 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL109755.1-201ENST00000401791 649 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR1294-201ENST00000408503 142 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL445183.3-201ENST00000414168 502 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC055731.1-201ENST00000474387 401 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC091860.1-201ENST00000505723 432 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 RNU6-528P-201ENST00000516926 100 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AP003066.2-201ENST00000529375 555 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC007375.1-201ENST00000554513 578 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AL359212.1-201ENST00000556608 614 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 DEFB122-202ENST00000569013 197 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR3618-201ENST00000580330 88 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC004853.1-201ENST00000604902 698 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC103710.2-201ENST00000609912 942 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC013476.2-201ENST00000614456 459 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 AC012150.2-201ENST00000621300 544 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 MIR4275-201ENST00000636486 87 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 U6.101-201ENST00000637707 76 ntBASIC1.4□□□□□ -2.19
TRAV3A0A0B4J244 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 RNU1-148P-201ENST00000384472 162 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 SNORA40.18-201ENST00000391200 128 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AL133264.1-201ENST00000407157 562 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 RNU2-33P-201ENST00000410344 192 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 RNU2-28P-201ENST00000410457 189 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AL590233.1-201ENST00000430017 456 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 MTND4LP7-201ENST00000431728 294 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC124916.1-201ENST00000444020 547 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AL096803.2-201ENST00000450032 677 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 RPS20P22-201ENST00000473700 357 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC068587.2-201ENST00000478386 781 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC013828.1-201ENST00000481845 158 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC068781.1-201ENST00000488231 618 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 LTV1P1-201ENST00000510683 1237 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 SCARNA3-201ENST00000517097 143 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC104581.2-201ENST00000572227 430 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 MIR3122-201ENST00000577243 73 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC040174.2-201ENST00000602701 465 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC025165.5-201ENST00000602802 578 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AP002906.1-201ENST00000603405 233 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 RPAP2P1-201ENST00000603626 1168 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC004067.1-201ENST00000608733 700 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 AC091932.3-201ENST00000624223 323 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 OR1S1-201ENST00000624470 978 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 MTND1P37-201ENST00000636562 264 ntBASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV3A0A0B4J244 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 RNA5SP363-201ENST00000365072 115 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 RNU4-27P-201ENST00000410889 139 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 LUZP4P1-201ENST00000415420 344 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 CYCSP48-201ENST00000417124 323 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC246680.2-201ENST00000422106 389 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC019178.2-201ENST00000423595 505 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 ZNF863P-201ENST00000426746 417 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC234064.1-201ENST00000436312 247 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC025181.1-201ENST00000477507 416 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC072039.1-201ENST00000477611 581 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 RPL23AP41-201ENST00000484754 458 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AL049874.1-201ENST00000489560 388 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC034222.1-201ENST00000494052 532 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC006499.2-201ENST00000513470 337 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 RN7SKP31-201ENST00000516354 278 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 RNU2-19P-201ENST00000517288 84 ntBASIC1.38□□□□□ -2.19
TRAV3A0A0B4J244 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms