Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR1EQ9GZS1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1EQ9GZS1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 UNC93B2-201ENST00000285383 730 ntBASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 CKBP1-201ENST00000565489 1086 ntBASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1EQ9GZS1 AC096733.2-201ENST00000609937 1394 ntBASIC19.33■□□□□ 0.69
POLR1EQ9GZS1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1EQ9GZS1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1EQ9GZS1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1EQ9GZS1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1EQ9GZS1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 AL596275.1-201ENST00000423464 877 ntBASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 RBM17P1-201ENST00000453646 1190 ntBASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 AC097488.1-201ENST00000507834 756 ntBASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1EQ9GZS1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms