Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 AC100590.1-201ENSMUST00000220318 1357 ntTSL 5 BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacnb1Q8R3Z5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cacnb1Q8R3Z5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb1Q8R3Z5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gm5133-201ENSMUST00000118940 1255 ntBASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gm37629-201ENSMUST00000193635 1050 ntBASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb1Q8R3Z5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm10013-201ENSMUST00000106074 672 ntBASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms