Protein–RNA interactions for Protein: Q8K301

Ddx52, Probable ATP-dependent RNA helicase DDX52, mousemouse

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx52Q8K301 Gm25016-201ENSMUST00000158399 131 ntBASIC15.75■□□□□ 0.11
Ddx52Q8K301 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Gm5587-201ENSMUST00000206270 674 ntBASIC15.75■□□□□ 0.11
Ddx52Q8K301 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.75■□□□□ 0.11
Ddx52Q8K301 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx52Q8K301 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Gm6623-201ENSMUST00000173570 544 ntBASIC15.74■□□□□ 0.11
Ddx52Q8K301 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.74■□□□□ 0.11
Ddx52Q8K301 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx52Q8K301 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx52Q8K301 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.72■□□□□ 0.11
Ddx52Q8K301 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx52Q8K301 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms