Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Satb1Q60611 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Satb1Q60611 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Satb1Q60611 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
Satb1Q60611 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Satb1Q60611 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 Gm15920-201ENSMUST00000118998 402 ntBASIC16.8■□□□□ 0.28
Satb1Q60611 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Satb1Q60611 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Satb1Q60611 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Satb1Q60611 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.8■□□□□ 0.28
Satb1Q60611 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Satb1Q60611 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.79■□□□□ 0.28
Satb1Q60611 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Satb1Q60611 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Satb1Q60611 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Satb1Q60611 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Satb1Q60611 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.79■□□□□ 0.28
Satb1Q60611 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Satb1Q60611 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Satb1Q60611 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.78■□□□□ 0.28
Satb1Q60611 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Satb1Q60611 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Rprl3-201ENSMUST00000157400 290 ntBASIC16.78■□□□□ 0.28
Satb1Q60611 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Satb1Q60611 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.78■□□□□ 0.28
Satb1Q60611 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.78■□□□□ 0.28
Satb1Q60611 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Gm10175-201ENSMUST00000086013 645 ntBASIC16.78■□□□□ 0.28
Satb1Q60611 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Satb1Q60611 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Satb1Q60611 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Satb1Q60611 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.77■□□□□ 0.28
Satb1Q60611 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Satb1Q60611 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.77■□□□□ 0.28
Satb1Q60611 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.77■□□□□ 0.28
Satb1Q60611 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.77■□□□□ 0.28
Satb1Q60611 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Satb1Q60611 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Satb1Q60611 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Satb1Q60611 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Satb1Q60611 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Satb1Q60611 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Satb1Q60611 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.27
Satb1Q60611 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Satb1Q60611 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms