Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC25.33■■□□□ 1.65
LTN1O94822 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 AP002383.4-201ENST00000442518 975 ntBASIC25.33■■□□□ 1.65
LTN1O94822 BX276092.5-203ENST00000456199 560 ntBASIC25.33■■□□□ 1.65
LTN1O94822 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.33■■□□□ 1.65
LTN1O94822 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC25.33■■□□□ 1.65
LTN1O94822 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.64
LTN1O94822 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTN1O94822 AC016734.2-201ENST00000624325 1377 ntBASIC25.32■■□□□ 1.64
LTN1O94822 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
LTN1O94822 KRT8P10-201ENST00000450021 1447 ntBASIC25.32■■□□□ 1.64
LTN1O94822 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.32■■□□□ 1.64
LTN1O94822 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTN1O94822 CHCHD2P8-201ENST00000429873 447 ntBASIC25.32■■□□□ 1.64
LTN1O94822 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.32■■□□□ 1.64
LTN1O94822 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTN1O94822 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
LTN1O94822 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.32■■□□□ 1.64
LTN1O94822 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 AL121672.3-201ENST00000608644 468 ntBASIC25.32■■□□□ 1.64
LTN1O94822 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 AL162741.1-201ENST00000565563 1558 ntBASIC25.32■■□□□ 1.64
LTN1O94822 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.32■■□□□ 1.64
LTN1O94822 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
LTN1O94822 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
LTN1O94822 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.31■■□□□ 1.64
LTN1O94822 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.31■■□□□ 1.64
LTN1O94822 MIR3652-201ENST00000579335 131 ntBASIC25.31■■□□□ 1.64
LTN1O94822 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LTN1O94822 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.31■■□□□ 1.64
LTN1O94822 KRT8P3-201ENST00000519669 1449 ntBASIC25.31■■□□□ 1.64
LTN1O94822 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC25.31■■□□□ 1.64
LTN1O94822 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.31■■□□□ 1.64
LTN1O94822 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.31■■□□□ 1.64
LTN1O94822 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
LTN1O94822 MIR3917-201ENST00000580971 93 ntBASIC25.31■■□□□ 1.64
LTN1O94822 AL136038.4-201ENST00000603606 1261 ntBASIC25.31■■□□□ 1.64
LTN1O94822 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTN1O94822 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC25.3■■□□□ 1.64
LTN1O94822 AC112907.3-201ENST00000577781 2400 ntBASIC25.3■■□□□ 1.64
LTN1O94822 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.3■■□□□ 1.64
LTN1O94822 AC026396.1-201ENST00000419388 421 ntBASIC25.3■■□□□ 1.64
LTN1O94822 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.3■■□□□ 1.64
LTN1O94822 RN7SL510P-201ENST00000581311 263 ntBASIC25.3■■□□□ 1.64
LTN1O94822 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LTN1O94822 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 AL391807.1-203ENST00000604392 2365 ntBASIC25.3■■□□□ 1.64
LTN1O94822 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTN1O94822 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
LTN1O94822 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.3■■□□□ 1.64
LTN1O94822 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.29■■□□□ 1.64
LTN1O94822 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.29■■□□□ 1.64
LTN1O94822 SKP2-204ENST00000508514 821 ntTSL 3 BASIC25.29■■□□□ 1.64
LTN1O94822 AC012615.1-201ENST00000565797 1299 ntBASIC25.29■■□□□ 1.64
LTN1O94822 AL732292.2-201ENST00000609649 430 ntBASIC25.29■■□□□ 1.64
LTN1O94822 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
LTN1O94822 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTN1O94822 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LTN1O94822 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.28■■□□□ 1.64
LTN1O94822 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC25.28■■□□□ 1.64
LTN1O94822 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.28■■□□□ 1.64
LTN1O94822 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.28■■□□□ 1.64
LTN1O94822 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms