Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.05■□□□□ -0
Capn1O35350 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.05■□□□□ -0
Capn1O35350 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Capn1O35350 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Capn1O35350 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.04■□□□□ -0
Capn1O35350 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Phf7-203ENSMUST00000226565 1971 ntBASIC15.04■□□□□ -0
Capn1O35350 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.04■□□□□ -0
Capn1O35350 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Gm7461-201ENSMUST00000058918 827 ntBASIC15.04■□□□□ -0
Capn1O35350 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.04■□□□□ -0
Capn1O35350 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.04■□□□□ -0
Capn1O35350 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Capn1O35350 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Capn1O35350 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.03■□□□□ -0
Capn1O35350 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.03■□□□□ -0
Capn1O35350 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Capn1O35350 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.03■□□□□ -0
Capn1O35350 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Capn1O35350 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.03■□□□□ -0
Capn1O35350 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Capn1O35350 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.03■□□□□ -0
Capn1O35350 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Capn1O35350 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.03■□□□□ -0
Capn1O35350 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Capn1O35350 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Capn1O35350 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Capn1O35350 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.02■□□□□ -0
Capn1O35350 Gm24589-201ENSMUST00000116692 94 ntBASIC15.02■□□□□ -0
Capn1O35350 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Capn1O35350 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.02■□□□□ -0
Capn1O35350 Gm34391-201ENSMUST00000203706 907 ntBASIC15.02■□□□□ -0
Capn1O35350 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Capn1O35350 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Capn1O35350 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.02□□□□□ -0.01
Capn1O35350 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Capn1O35350 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Capn1O35350 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Capn1O35350 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Capn1O35350 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Capn1O35350 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms