Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 AC124864.1-201ENST00000623408 392 ntBASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TMEM88BA6NKF7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TMEM88BA6NKF7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TMEM88BA6NKF7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TMEM88BA6NKF7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 GPX1P2-201ENST00000429271 606 ntBASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 MCCD1P1-208ENST00000445732 328 ntBASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 GUSBP12-201ENST00000513727 720 ntBASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 FEM1AP1-201ENST00000431297 1995 ntBASIC22.19■■□□□ 1.14
TMEM88BA6NKF7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 POM121L3P-201ENST00000419331 1163 ntBASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 MINOS1P3-201ENST00000457048 203 ntBASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 AP005901.3-202ENST00000581653 237 ntBASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 AC027601.4-201ENST00000611259 610 ntBASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 FAM215A-202ENST00000632077 792 ntBASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.18■■□□□ 1.14
TMEM88BA6NKF7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms