Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 USP12PX-201ENST00000432383 1057 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 USP9YP8-201ENST00000441913 500 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC002381.1-201ENST00000447049 280 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC079776.3-201ENST00000450665 370 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 RPS20P20-201ENST00000460498 340 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC128713.1-201ENST00000471495 306 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC080128.1-201ENST00000474389 1917 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 TRBV12-1-201ENST00000479785 344 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 RPS29P20-201ENST00000489592 171 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 MIR5708-201ENST00000579723 85 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 VN1R87P-201ENST00000596706 487 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC243773.3-201ENST00000613270 256 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC253576.2-201ENST00000618815 580 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 AC009487.4-201ENST00000624969 3585 ntBASIC2.04□□□□□ -2.08
USH1CQ9Y6N9 MTND4P27-201ENST00000450813 1354 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AL603865.2-201ENST00000401679 213 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 RPL12P25-201ENST00000455592 494 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 ANKRD26P4-201ENST00000455755 950 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 RPL26P9-201ENST00000457466 433 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 snoU13.8-201ENST00000458890 104 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC097493.1-201ENST00000463958 372 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC114981.1-201ENST00000503897 678 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 OR5AQ1P-201ENST00000527596 927 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC091544.4-201ENST00000555268 342 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 SNORD14A-201ENST00000606526 91 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AC025594.3-201ENST00000613068 790 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 MIR4275-201ENST00000636486 87 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH1CQ9Y6N9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
USH1CQ9Y6N9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 RNU6-884P-201ENST00000363889 107 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 RPL7P27-201ENST00000403775 720 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC023141.4-201ENST00000412031 328 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 HMGB1P49-201ENST00000418882 569 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 GPM6BP3-201ENST00000442797 145 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 COL6A4P2-205ENST00000509855 506 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC104417.1-201ENST00000523974 751 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC118942.1-201ENST00000529674 1035 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC135628.1-201ENST00000568867 534 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 FTX_3.1-201ENST00000610451 147 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC109454.4-201ENST00000623411 649 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AC064859.1-201ENST00000624741 174 ntBASIC2.02□□□□□ -2.09
USH1CQ9Y6N9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 Y_RNA.234-201ENST00000364409 97 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 RNU6-220P-201ENST00000390919 107 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AL079342.2-201ENST00000403367 482 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC093281.2-201ENST00000510153 597 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AL512310.1-201ENST00000548639 172 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC021749.1-201ENST00000604322 607 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC007938.3-201ENST00000604965 623 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 AC013476.2-201ENST00000614456 459 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 MTND1P37-201ENST00000636562 264 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 CDR1-202ENST00000625883 1485 ntBASIC2.01□□□□□ -2.09
USH1CQ9Y6N9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms