Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 AL354950.2-201ENST00000617939 290 ntBASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 AC025034.2-201ENST00000623264 286 ntBASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 AC093648.1-201ENST00000623546 606 ntBASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.41□□□□□ -1.86
CLDN16Q9Y5I7 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.86
CLDN16Q9Y5I7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-288P-201ENST00000363690 104 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 SNORA24.1-201ENST00000384401 135 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 CIR1P3-201ENST00000405137 479 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MTCO1P20-201ENST00000425366 358 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 CYCSP4-201ENST00000429682 331 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-953P-201ENST00000459154 107 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC106707.2-201ENST00000484182 374 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-677P-201ENST00000516914 101 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MTND1P35-201ENST00000526739 508 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC104383.1-201ENST00000530297 370 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC010591.1-201ENST00000603941 649 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC093788.1-201ENST00000609356 927 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MIR6076-201ENST00000617521 113 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 MTND5P17-201ENST00000418405 1603 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.87
CLDN16Q9Y5I7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNY4P14-201ENST00000363656 96 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-190P-201ENST00000384154 102 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-606P-201ENST00000384721 111 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 DBIP2-201ENST00000419076 262 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC007919.1-201ENST00000429380 217 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 MRPS10P2-201ENST00000431226 381 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC091286.1-201ENST00000431233 461 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AL596276.1-201ENST00000434465 418 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 MTND1P18-201ENST00000448191 573 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC003071.1-201ENST00000451219 789 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RPL30P14-201ENST00000482744 348 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC104619.4-201ENST00000510773 249 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 SNORD27.1-201ENST00000516319 72 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP143-201ENST00000516936 115 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP503-201ENST00000517047 117 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC109635.3-201ENST00000529536 185 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC103843.2-201ENST00000530523 682 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 OR5B19P-201ENST00000531766 928 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 OR5B10P-201ENST00000532869 642 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AL157687.1-201ENST00000554853 619 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AL365204.3-201ENST00000612448 685 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC007014.2-201ENST00000615581 479 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 MIR3688-2-201ENST00000636963 87 ntBASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN16Q9Y5I7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms