Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 RPL32P34-201ENST00000486380 400 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 RPS15AP34-201ENST00000487776 387 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AF213884.2-201ENST00000510417 903 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AMZ2P1-203ENST00000565833 850 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 RN7SL703P-201ENST00000578485 302 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 MIR3609-201ENST00000582661 80 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC025946.2-201ENST00000603398 234 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AL670379.4-201ENST00000605279 254 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC068944.2-201ENST00000610373 403 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AL138880.2-201ENST00000616214 239 ntBASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM4Q9Y4Z0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LSM4Q9Y4Z0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LSM4Q9Y4Z0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LSM4Q9Y4Z0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.15□□□□□ -1.9
LSM4Q9Y4Z0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SNORA60-201ENST00000362396 134 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1090P-201ENST00000364065 94 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SNORA4.3-201ENST00000365564 137 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 Y_RNA.453-201ENST00000384223 109 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-140P-201ENST00000384566 108 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-908P-201ENST00000410160 94 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 MTCYBP8-201ENST00000422855 651 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AL592045.1-201ENST00000429867 352 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC083863.1-201ENST00000438811 231 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SEPT14P3-201ENST00000439401 183 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 HMGB1P37-201ENST00000439613 609 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AL732372.2-207ENST00000445840 183 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SEPT14P2-201ENST00000453405 183 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 CECR9-201ENST00000453421 199 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 PCBP2P3-201ENST00000509726 843 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC006445.2-201ENST00000510061 472 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SEPT14P4-201ENST00000513445 186 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 SNORA70.14-201ENST00000516205 110 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 FO082796.1-201ENST00000523795 183 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC007014.2-201ENST00000615581 479 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 FER-210ENST00000628534 558 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM4Q9Y4Z0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 CISD1P1-201ENST00000393907 327 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 MIR1277-201ENST00000408536 78 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 MIR1183-201ENST00000408856 89 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 RNU4-46P-201ENST00000410818 138 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 AL160275.3-201ENST00000423876 471 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 ZNF863P-201ENST00000426746 417 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 AC000111.3-201ENST00000433478 193 ntBASIC3.14□□□□□ -1.91
LSM4Q9Y4Z0 RPS29P7-201ENST00000439662 171 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms