Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC078814.3-201ENST00000553036 491 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC104072.1-201ENST00000568817 668 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 RPS3AP23-202ENST00000574601 686 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC025165.5-201ENST00000602802 578 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC024060.1-201ENST00000607052 494 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC107214.2-201ENST00000608204 634 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC012640.5-201ENST00000623897 319 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AP003476.1-201ENST00000623984 516 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC079416.3-201ENST00000624479 549 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC025048.6-202ENST00000627667 438 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA40.2-201ENST00000390847 128 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 SNORD23.1-201ENST00000408212 104 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 UBE2FP1-201ENST00000416536 447 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 USP9YP26-201ENST00000421008 661 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC003685.2-201ENST00000422795 395 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 EIF4EP4-201ENST00000424916 578 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC098826.1-201ENST00000433943 471 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 PGBD4P3-201ENST00000440731 581 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC124916.1-201ENST00000444020 547 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 MTND1P31-201ENST00000449206 961 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 MTND2P31-201ENST00000512602 616 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 RN7SKP24-201ENST00000515888 284 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA31.6-201ENST00000516241 130 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP320-201ENST00000516263 124 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC021451.1-201ENST00000523498 1129 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL133241.1-201ENST00000556832 487 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 CYCSP2-201ENST00000558168 301 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AL512347.1-201ENST00000566420 503 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC112220.2-201ENST00000605513 533 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC104763.3-201ENST00000613765 618 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 U4atac.1-201ENST00000618345 95 ntBASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RHBDD3Q9Y3P4 AC069528.2-201ENST00000624849 1991 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA5B-201ENST00000363786 132 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP184-201ENST00000411071 108 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 NUP35P1-201ENST00000422734 947 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 BX276092.3-201ENST00000424182 230 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 RPS3AP44-201ENST00000425466 790 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 SKA2P1-201ENST00000425592 390 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 MTND1P28-201ENST00000435623 950 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC020550.1-201ENST00000447385 163 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AL109933.2-201ENST00000452651 260 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AL121769.1-201ENST00000469473 401 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 RPL23AP45-201ENST00000476406 468 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC118465.1-201ENST00000513820 1271 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC105245.1-201ENST00000581934 244 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC061975.8-201ENST00000587058 721 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AL161423.1-201ENST00000613700 262 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC126544.2-201ENST00000625174 749 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC099063.3-201ENST00000642066 185 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 AC016717.2-201ENST00000609089 5141 ntBASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.12□□□□□ -2.07
RHBDD3Q9Y3P4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-486P-201ENST00000363116 107 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 RNU2-68P-201ENST00000410878 191 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 NPM1P11-201ENST00000417106 855 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 RPL37P6-201ENST00000460682 294 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC008481.1-201ENST00000463278 396 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms