Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL591135.1-201ENST00000401578 5914 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 Y_RNA.35-201ENST00000362601 101 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 MIR765-201ENST00000390226 114 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC006461.1-201ENST00000412637 326 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC006116.3-201ENST00000592968 361 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC118658.2-201ENST00000618697 459 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC106754.2-201ENST00000623006 233 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 OFD1P17-201ENST00000437639 3018 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 ADAM24P-201ENST00000398655 2101 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AC097461.1-201ENST00000568928 2821 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 AL451142.2-201ENST00000429076 2090 ntBASIC6.8□□□□□ -1.32
TRIM35Q9UPQ4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 SAGE4P-201ENST00000442271 3381 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-915P-201ENST00000364943 103 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 MIR32-201ENST00000384965 70 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 MIR600-201ENST00000385007 98 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 MIR153-2-201ENST00000385225 87 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AL035079.1-201ENST00000405210 287 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AL451062.2-201ENST00000427515 271 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC109810.1-201ENST00000534066 224 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AL157871.3-201ENST00000557231 293 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC002545.1-201ENST00000592511 181 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC005296.1-201ENST00000616145 209 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 RNA5SP439-201ENST00000617595 124 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 CR381572.2-201ENST00000624852 397 ntBASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM35Q9UPQ4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-428P-201ENST00000362942 107 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RN7SKP153-201ENST00000365026 316 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 SNORA48.4-201ENST00000391089 134 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-1248P-201ENST00000391096 64 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 Y_RNA.595-201ENST00000410403 105 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-1025P-201ENST00000410629 104 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RPS29P10-201ENST00000439197 166 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 REG1CP-206ENST00000447469 496 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-1218P-201ENST00000458990 108 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RN7SL189P-201ENST00000468631 289 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-65P-201ENST00000516332 98 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 Y_RNA.685-201ENST00000516532 108 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AC011447.4-201ENST00000587562 111 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AC008121.1-201ENST00000603244 268 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AL591926.8-201ENST00000616876 211 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 MIR1245B-201ENST00000636115 69 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AC020656.2-201ENST00000613291 5309 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 AL596211.1-201ENST00000569873 2277 ntBASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TRIM35Q9UPQ4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
TRIM35Q9UPQ4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 CUL1P1-201ENST00000509510 2425 ntBASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 BTF3L4P2-201ENST00000392798 346 ntBASIC6.77□□□□□ -1.33
TRIM35Q9UPQ4 AL592045.1-201ENST00000429867 352 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms