Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 FCF1P6-201ENST00000456841 595 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.54□□□□□ -2
CDH9Q9ULB4 MRPS17P3-201ENST00000465453 385 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC023538.1-201ENST00000534576 736 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 UBE2L4-201ENST00000587688 464 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.54□□□□□ -2
CDH9Q9ULB4 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AL133445.2-201ENST00000611191 527 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 AL158801.5-201ENST00000623123 465 ntBASIC2.54□□□□□ -2
CDH9Q9ULB4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CDH9Q9ULB4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CDH9Q9ULB4 RNU6-853P-201ENST00000364306 107 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 RNU4-68P-201ENST00000364314 141 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.53□□□□□ -2
CDH9Q9ULB4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC027673.1-201ENST00000456245 405 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC010587.2-201ENST00000511727 448 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.53□□□□□ -2
CDH9Q9ULB4 RNA5SP216-201ENST00000516111 123 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.53□□□□□ -2
CDH9Q9ULB4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
CDH9Q9ULB4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC060771.1-201ENST00000582031 164 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AC061975.8-201ENST00000587058 721 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AF038458.1-201ENST00000588406 262 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AL596327.1-201ENST00000603629 213 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AL357094.1-201ENST00000603845 844 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AC067747.1-201ENST00000608026 250 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.53□□□□□ -2
CDH9Q9ULB4 AC009269.6-201ENST00000621778 588 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 PCMTD1P7-201ENST00000634506 357 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
CDH9Q9ULB4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.53□□□□□ -2
CDH9Q9ULB4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.53□□□□□ -2
CDH9Q9ULB4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MIR620-201ENST00000385232 95 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MIR888-201ENST00000401186 77 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MIR320C1-201ENST00000408566 88 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MTCO3P45-201ENST00000443036 613 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 TPT1P14-201ENST00000448018 505 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MTCO1P27-201ENST00000448269 226 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AP000542.1-201ENST00000448473 371 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 RPL12P25-201ENST00000455592 494 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 RPS15AP36-201ENST00000492022 382 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC034222.1-201ENST00000494052 532 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 MTND4LP5-201ENST00000605152 292 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 ELF2P3-201ENST00000445099 1506 ntBASIC2.52□□□□□ -2.01
CDH9Q9ULB4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH9Q9ULB4 AC093536.2-201ENST00000565257 1406 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 RNU4-92P-201ENST00000363783 136 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 RNU6-301P-201ENST00000384277 107 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 CCNG1P1-201ENST00000406783 885 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 MTCO1P17-201ENST00000411522 491 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC083875.1-201ENST00000419509 405 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms