Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 RNU6-1090P-201ENST00000364065 94 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.450-201ENST00000384198 113 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 SSXP9-201ENST00000417503 292 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC244098.2-201ENST00000422068 99 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MTND4LP11-201ENST00000422184 280 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 DPPA2P1-201ENST00000428060 556 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MTND1P2-201ENST00000430604 821 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 RPL23AP30-201ENST00000432419 501 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC092989.1-201ENST00000481235 277 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MTAPP1-201ENST00000489154 819 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC026427.2-201ENST00000506228 536 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC114797.1-201ENST00000514003 728 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.704-201ENST00000516851 102 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC006254.3-201ENST00000603353 884 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC103710.2-201ENST00000609912 942 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 AC006023.2-201ENST00000609916 167 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MIR3688-2-201ENST00000636963 87 ntBASIC3.36□□□□□ -1.87
SIX4Q9UIU6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX4Q9UIU6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.9-201ENST00000362354 101 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RNU6-335P-201ENST00000364563 113 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RNU6-456P-201ENST00000384493 107 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RNU6-516P-201ENST00000411381 104 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AL137014.1-201ENST00000420490 1226 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 ELOCP14-201ENST00000428070 331 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RPS15AP9-201ENST00000439856 381 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 ELOCP7-201ENST00000439968 331 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 MTATP6P30-201ENST00000443540 664 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AL671855.1-201ENST00000446875 1203 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC016696.1-201ENST00000446949 318 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC108059.3-201ENST00000456388 214 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RNU7-59P-201ENST00000459101 61 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RN7SL442P-201ENST00000473804 320 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC023194.1-201ENST00000493084 308 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC135721.1-201ENST00000497954 479 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC090572.1-201ENST00000519251 160 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 HMGB1P33-201ENST00000563485 527 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC037471.2-201ENST00000564941 598 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 SNRPGP15-201ENST00000600149 222 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC139792.3-201ENST00000623525 224 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 MIR622-201ENST00000638396 96 ntBASIC3.35□□□□□ -1.87
SIX4Q9UIU6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SIX4Q9UIU6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX4Q9UIU6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX4Q9UIU6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
SIX4Q9UIU6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SIX4Q9UIU6 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms