Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC044792.1-201ENST00000593294 196 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC007742.2-201ENST00000618226 398 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 uc_338.11-201ENST00000619132 160 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 CR392039.5-201ENST00000623201 510 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 SNORA50A-202ENST00000629536 136 ntBASIC3.93□□□□□ -1.78
DKK3Q9UBP4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DKK3Q9UBP4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNA5SP295-201ENST00000362655 121 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU6-335P-201ENST00000364563 113 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU6-432P-201ENST00000384196 109 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU6-332P-201ENST00000391193 108 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU6-510P-201ENST00000391239 108 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AL162578.1-201ENST00000406202 378 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU2-39P-201ENST00000410604 198 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU2-71P-201ENST00000411395 189 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RPS7P15-201ENST00000415804 584 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 SETP5-201ENST00000437270 562 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RNU7-182P-201ENST00000459009 62 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RPL7P23-201ENST00000493874 747 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RN7SL323P-201ENST00000494712 295 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC116562.3-201ENST00000506136 177 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 RN7SKP219-201ENST00000516825 296 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 HMGB1P41-201ENST00000520234 440 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 HMGN1P28-201ENST00000521340 364 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC100870.1-201ENST00000522035 505 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC068587.5-201ENST00000528506 175 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC023050.3-201ENST00000541142 333 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 BNIP3P6-201ENST00000549284 499 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 SRGNP1-201ENST00000603392 451 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 IGHV3-29-201ENST00000604817 344 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 FP236240.3-201ENST00000623061 327 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AC100810.6-201ENST00000638068 285 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
DKK3Q9UBP4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 MAPK10-373ENST00000641983 6772 ntBASIC3.92□□□□□ -1.78
DKK3Q9UBP4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC073343.1-201ENST00000328239 651 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL109755.1-201ENST00000401791 649 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL136372.1-201ENST00000403060 228 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL356432.1-201ENST00000405809 419 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC009161.1-201ENST00000417306 376 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RPL21P109-201ENST00000422213 475 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RPL35AP12-201ENST00000425362 338 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 TAAR7P-201ENST00000436141 242 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 SNORA71B-202ENST00000439232 272 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RANP8-201ENST00000444720 713 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RPL7P12-201ENST00000446719 750 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 SNORD97-201ENST00000459187 142 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 snoU13.3-201ENST00000459441 104 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 MRPS17P3-201ENST00000465453 385 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC091885.1-201ENST00000506658 268 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RNA5SP164-201ENST00000516533 110 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 RNU6-64P-201ENST00000517119 105 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC103783.1-201ENST00000520506 373 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC093331.1-201ENST00000521474 169 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 DEFB108D-201ENST00000527787 222 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AP005435.4-201ENST00000529514 284 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 OR5AL2P-201ENST00000532185 920 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC243972.3-201ENST00000539655 198 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC125611.2-201ENST00000551907 647 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC037471.2-201ENST00000564941 598 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 MIR4293-201ENST00000584305 78 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AL031176.1-201ENST00000604554 466 ntBASIC3.91□□□□□ -1.78
DKK3Q9UBP4 AC007179.3-201ENST00000604976 235 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms