Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 FABP5P15-201ENST00000453566 214 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-1208P-201ENST00000459588 107 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RPL21P41-201ENST00000459863 264 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC007547.1-201ENST00000462177 490 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RPS23P3-201ENST00000470993 430 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RPL30P5-201ENST00000494923 336 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC008958.1-201ENST00000511047 682 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC104136.1-201ENST00000512969 394 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 MTCO1P35-201ENST00000515270 228 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU1-61P-201ENST00000516107 151 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-875P-201ENST00000516488 106 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 RNU6-1314P-201ENST00000517139 104 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC009994.1-201ENST00000606889 253 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC019193.2-201ENST00000610012 634 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC063943.3-201ENST00000615562 356 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AP003400.5-201ENST00000624827 617 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AC244205.2-202ENST00000635781 342 ntBASIC4.03□□□□□ -1.76
MKS1Q9NXB0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MKS1Q9NXB0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RNU6-845P-201ENST00000362578 103 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.100-201ENST00000363141 102 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RNU6-371P-201ENST00000364283 108 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 U3.12-201ENST00000364498 214 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.373-201ENST00000365600 103 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 SNORA16.2-201ENST00000390991 127 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AL645937.1-202ENST00000421799 937 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 GPM6BP2-201ENST00000432046 144 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC092573.2-201ENST00000434546 243 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 GPM6BP1-201ENST00000446387 144 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC008264.1-201ENST00000447612 367 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC073264.2-201ENST00000448886 166 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RPL21P93-201ENST00000480465 489 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AF213884.1-201ENST00000488102 463 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 CEACAMP10-202ENST00000495431 496 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC009901.1-201ENST00000506703 541 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC114781.4-201ENST00000513707 639 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RN7SKP13-201ENST00000515933 244 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RNU6-1315P-201ENST00000517187 99 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 RPL7P20-201ENST00000520308 745 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 CASP1P1-201ENST00000526345 212 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 SYF2P1-201ENST00000550658 413 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 OR11H5P-201ENST00000554039 926 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 PSMA3P-201ENST00000555485 635 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC053481.4-201ENST00000583164 216 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AL161729.3-201ENST00000603533 673 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 MIR8058-201ENST00000615737 89 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 AC100827.5-201ENST00000615883 426 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MKS1Q9NXB0 MTND4P35-201ENST00000604257 1375 ntBASIC4.02□□□□□ -1.77
MKS1Q9NXB0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AP004289.2-201ENST00000444413 1457 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC079741.1-201ENST00000321498 212 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.167-201ENST00000363735 109 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 RNU6-434P-201ENST00000384376 107 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 MIR325-201ENST00000385260 98 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 MIR301A-201ENST00000385261 86 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 MIR591-201ENST00000385290 95 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC063979.1-201ENST00000415539 377 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AC083863.1-201ENST00000438811 231 ntBASIC4.01□□□□□ -1.77
MKS1Q9NXB0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms