Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTCO1P47-201ENST00000523889 1271 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 FAM35CP-201ENST00000554755 2470 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC012493.2-201ENST00000595083 291 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC174048.1-201ENST00000603389 144 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AL355598.1-201ENST00000604169 202 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC104763.2-201ENST00000604179 382 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AP000860.1-201ENST00000605250 559 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC004805.2-201ENST00000605382 482 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC096577.2-201ENST00000611455 153 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC007318.2-201ENST00000620999 243 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC078883.4-201ENST00000623218 367 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.87
BLOC1S4Q9NUP1 HSPE1P11-201ENST00000339579 310 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-884P-201ENST00000363889 107 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 SNORD46.1-201ENST00000364139 104 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC245054.2-201ENST00000415639 319 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 ISCA1P1-201ENST00000426679 387 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC010153.1-201ENST00000432862 727 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RPL23AP58-201ENST00000440453 469 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RPL37P4-201ENST00000448908 268 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RN7SL75P-201ENST00000461926 281 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 MRPS17P3-201ENST00000465453 385 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC118465.1-201ENST00000513820 1271 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RNU7-51P-201ENST00000516560 62 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-143P-201ENST00000516942 93 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC093331.1-201ENST00000521474 169 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 MIR3944-201ENST00000581277 108 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC012065.4-201ENST00000602445 679 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 AC103710.2-201ENST00000609912 942 ntBASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
BLOC1S4Q9NUP1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AL035425.3-201ENST00000564206 4996 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AF228730.1-201ENST00000397972 663 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 RPL26P27-201ENST00000414397 437 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 CYCSP32-201ENST00000440548 321 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC117440.1-201ENST00000474107 571 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 RPL21P5-201ENST00000554662 472 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AL359212.1-201ENST00000556608 614 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC025281.1-201ENST00000567026 265 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 MIR3682-201ENST00000581338 84 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 BNIP3P8-201ENST00000597863 560 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AL035413.2-201ENST00000604801 525 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 DUSP12P1-201ENST00000612874 516 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 MIR8057-201ENST00000620957 69 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 AC025048.6-202ENST00000627667 438 ntBASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
BLOC1S4Q9NUP1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 SNORA38.1-201ENST00000364172 131 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms