Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG3Q9NT62 RNU6-472P-201ENST00000384299 107 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 Y_RNA.485-201ENST00000384395 102 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 U8.11-201ENST00000384699 133 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 U8.12-201ENST00000384701 133 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 MIR548M-201ENST00000408260 86 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 OR2AS1P-201ENST00000427827 319 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AL358472.1-201ENST00000431295 329 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 RPL7P28-201ENST00000437739 740 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC093156.1-201ENST00000440382 670 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 RPS26P56-201ENST00000444468 240 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG3Q9NT62 U8.18-201ENST00000459285 133 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 RPL21P93-201ENST00000480465 489 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 RNU6-120P-201ENST00000516077 103 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 RNU6-789P-201ENST00000517105 102 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG3Q9NT62 MIR4504-201ENST00000577413 92 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC012468.1-201ENST00000604888 430 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AL031666.3-201ENST00000609320 1006 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AL355365.1-201ENST00000616480 294 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG3Q9NT62 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG3Q9NT62 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC091812.1-201ENST00000432235 1948 ntBASIC5.27□□□□□ -1.57
ATG3Q9NT62 AC005592.1-201ENST00000566527 1640 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG3Q9NT62 RNU6-1207P-201ENST00000384343 107 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AL356968.1-201ENST00000416622 474 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 ATG3P1-201ENST00000419507 911 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 EIF4EP1-201ENST00000422311 642 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 RPS12P5-201ENST00000423449 371 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 RPL23AP74-201ENST00000437246 471 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 SNRPFP3-201ENST00000457792 225 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC092451.1-201ENST00000480211 153 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AL139099.1-201ENST00000497398 403 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 TXNP6-201ENST00000510190 310 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC018797.3-201ENST00000513388 1241 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC023157.2-201ENST00000540596 141 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC060771.1-201ENST00000582031 164 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC011155.2-201ENST00000623202 216 ntBASIC5.26□□□□□ -1.57
ATG3Q9NT62 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG3Q9NT62 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG3Q9NT62 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG3Q9NT62 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG3Q9NT62 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG3Q9NT62 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG3Q9NT62 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG3Q9NT62 RNU6-28P-201ENST00000362378 107 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 RNU6-874P-201ENST00000362390 105 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AL360182.1-201ENST00000397433 468 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 MTCO2P33-201ENST00000402100 465 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 NDUFS5P1-201ENST00000405668 289 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 RN7SKP156-201ENST00000410308 342 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC068533.1-201ENST00000418542 415 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 MED13P1-201ENST00000428342 171 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 FTH1P1-201ENST00000437933 532 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC004801.2-202ENST00000463559 283 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC008571.1-201ENST00000467232 300 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC108145.1-201ENST00000503770 153 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 MTND1P19-201ENST00000511780 315 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC093853.1-201ENST00000515689 483 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 RNA5SP503-201ENST00000517047 117 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 AC092747.3-201ENST00000603769 301 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 MIR8062-201ENST00000621515 85 ntBASIC5.25□□□□□ -1.57
ATG3Q9NT62 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.25□□□□□ -1.57
ATG3Q9NT62 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG3Q9NT62 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms