Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CUL1P1-201ENST00000509510 2425 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC110754.1-201ENST00000399740 601 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 U3.42-201ENST00000408746 214 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RPL7P54-201ENST00000438336 674 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RPL36AP51-201ENST00000487216 318 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC114797.1-201ENST00000514003 728 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RNU2-10P-201ENST00000516375 211 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 MTND1P35-201ENST00000526739 508 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 OR4R1P-201ENST00000529879 463 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 GLUD1P4-201ENST00000590914 418 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC025449.1-201ENST00000603896 529 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC008536.2-201ENST00000607284 349 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC093788.1-201ENST00000609356 927 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.85□□□□□ -1.79
VPS45Q9NRW7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS45Q9NRW7 AC022336.2-201ENST00000568966 2538 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RPL7P26-201ENST00000333817 754 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RNU6-534P-201ENST00000364877 106 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RNA5SP267-201ENST00000364893 126 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RNU6-867P-201ENST00000364956 107 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 MIR514A1-201ENST00000385133 98 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 FGF7P8-201ENST00000402994 292 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 USP12PX-201ENST00000432383 1057 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RPL23AP30-201ENST00000432419 501 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 HMGB1P31-201ENST00000437242 427 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 HMGN2P20-201ENST00000437531 273 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC016696.1-201ENST00000446949 318 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 TRBV12-2-201ENST00000489763 344 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RPL30P5-201ENST00000494923 336 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC074344.1-201ENST00000512823 224 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 RNA5SP208-201ENST00000516156 78 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 OR5B10P-201ENST00000532869 642 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC128657.1-201ENST00000549459 145 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 OR4H12P-201ENST00000556269 907 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 HMGB1P6-201ENST00000569046 646 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AL162413.1-201ENST00000603198 110 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 SNORA62.6-201ENST00000606322 83 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AC022306.2-201ENST00000617563 647 ntBASIC3.84□□□□□ -1.79
VPS45Q9NRW7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS45Q9NRW7 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.8
VPS45Q9NRW7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.8
VPS45Q9NRW7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms