Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNA5SP21-201ENST00000410917 96 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC097463.2-201ENST00000421074 142 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 NUP35P1-201ENST00000422734 947 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC019097.1-201ENST00000424783 735 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 ISCA1P1-201ENST00000426679 387 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MTCO1P3-201ENST00000429327 192 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RPS15AP28-201ENST00000435088 386 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 PDSS1P2-201ENST00000449397 678 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RPL26P28-201ENST00000451325 435 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RPL18AP17-201ENST00000455326 198 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RPS29P33-201ENST00000456717 146 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MTND5P13-201ENST00000513046 1079 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 HMGN1P15-201ENST00000513870 295 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA48.11-201ENST00000517015 89 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC034114.1-201ENST00000520293 285 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL121821.2-201ENST00000556081 394 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL160236.1-201ENST00000556317 195 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC073544.2-201ENST00000601155 540 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC021171.1-201ENST00000603137 706 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC098483.2-201ENST00000603158 454 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AL713866.2-201ENST00000603579 219 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MTCYBP22-201ENST00000603788 447 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC098826.3-201ENST00000603823 466 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC103810.8-201ENST00000607347 118 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 uc_338.5-201ENST00000611839 155 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MIR5739-201ENST00000619803 80 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 Z75746.1-201ENST00000440243 2080 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-97P-201ENST00000363387 104 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RNA5SP240-201ENST00000365355 128 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RN7SKP187-201ENST00000365536 330 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL109941.1-201ENST00000401925 229 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL591034.2-201ENST00000402839 359 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RNU2-42P-201ENST00000410697 113 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC079355.1-201ENST00000421770 223 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL160275.3-201ENST00000423876 471 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL360081.1-201ENST00000428299 555 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MTND2P29-201ENST00000438595 412 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL161788.1-201ENST00000441805 169 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MTCO3P45-201ENST00000443036 613 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RPL21P89-201ENST00000444021 467 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC106707.2-201ENST00000484182 374 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC004815.1-201ENST00000484185 331 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC008953.1-201ENST00000497334 318 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RPL23AP63-201ENST00000498752 471 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 TPT1P8-201ENST00000510120 555 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 RNA5SP34-201ENST00000516887 130 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 NDUFA5P6-201ENST00000542110 379 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC079598.5-201ENST00000547460 117 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MIR5685-201ENST00000579080 79 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC007448.1-201ENST00000582714 234 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL355598.1-201ENST00000604169 202 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AP005229.2-201ENST00000609980 697 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC009237.15-201ENST00000610252 501 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC023158.2-201ENST00000614876 543 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MIR6736-201ENST00000616799 59 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MIR6132-201ENST00000622083 109 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC138627.2-201ENST00000624202 601 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 MIR1291-201ENST00000627649 87 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 LINC02211-204ENST00000642024 1070 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms