Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC107953.1-201ENST00000522216 297 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 DUXAP5-201ENST00000529668 529 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC068135.2-201ENST00000569293 1028 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC073308.1-201ENST00000623696 305 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 Z99571.1-201ENST00000636677 394 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 ICE2P2-201ENST00000483823 2787 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-1074P-201ENST00000383995 104 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 MIR483-201ENST00000385070 76 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 SPA17P1-201ENST00000416656 452 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 OFD1P18Y-201ENST00000420889 959 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 SNORD13-201ENST00000459299 104 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AP005660.1-201ENST00000522972 293 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 DNAJC19P9-201ENST00000555084 351 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AC067805.1-201ENST00000559344 470 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 ATP5F1P7-201ENST00000567330 760 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 MIR4422-201ENST00000581938 83 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AC073111.2-201ENST00000605657 1075 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL021997.1-201ENST00000605757 193 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AL512506.2-201ENST00000624472 458 ntBASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.73□□□□□ -2.29
SMCO4Q9NRQ5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 NSRP1P1-201ENST00000444067 1693 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-748P-201ENST00000384648 107 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 OR4K6P-201ENST00000416478 897 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 BTF3P4-201ENST00000418852 495 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC006548.1-201ENST00000427470 102 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 HMGB1P9-201ENST00000429856 646 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AL590365.1-201ENST00000450788 243 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC093677.1-201ENST00000514414 678 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC022447.1-201ENST00000515358 464 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC023825.1-201ENST00000566704 1030 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 CR381572.1-201ENST00000625098 102 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 PISRT1-201ENST00000626175 531 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 MIR7157-201ENST00000635801 60 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 AC008568.2-201ENST00000623862 2313 ntBASIC0.72□□□□□ -2.29
SMCO4Q9NRQ5 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-1243P-201ENST00000364028 107 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 MICF-203ENST00000432679 129 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 CR769776.1-201ENST00000441254 787 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC069306.1-201ENST00000507006 843 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC015849.6-201ENST00000605454 474 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 RMST_5.1-201ENST00000618704 126 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 AC091953.2-201ENST00000623979 160 ntBASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC0.71□□□□□ -2.3
SMCO4Q9NRQ5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RNU4-38P-201ENST00000364472 129 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-1222P-201ENST00000384615 107 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RNU6-1197P-201ENST00000391183 107 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RN7SKP61-201ENST00000410642 295 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC080013.2-201ENST00000460866 323 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AP002371.1-201ENST00000463604 433 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RPS29P21-201ENST00000496272 170 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC093852.1-201ENST00000503587 266 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC008837.1-201ENST00000511513 412 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC004923.2-201ENST00000529649 369 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AL031274.2-201ENST00000599419 203 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AL138478.1-201ENST00000612252 832 ntBASIC0.7□□□□□ -2.3
SMCO4Q9NRQ5 AC104763.3-201ENST00000613765 618 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms