Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC007823.1-201ENST00000569932 1566 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 BDP1P-201ENST00000582658 1990 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNU6-639P-201ENST00000384074 107 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNU6-574P-201ENST00000384265 107 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNU6-1105P-201ENST00000384774 107 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 MIR183-201ENST00000384958 110 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 MIR513A2-201ENST00000385249 127 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 MIR548K-201ENST00000408406 116 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNU2-29P-201ENST00000410423 189 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 PMCHL1-202ENST00000423102 261 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AL358176.2-201ENST00000425769 204 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC234775.1-201ENST00000454247 670 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 RPS27AP1-201ENST00000475545 471 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC012158.1-204ENST00000483430 465 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC106872.2-201ENST00000494303 480 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNU6-1088P-201ENST00000516850 104 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 RNA5SP503-201ENST00000517047 117 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 MIR4703-201ENST00000577728 79 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 BNIP3P25-201ENST00000596023 559 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC012443.1-201ENST00000605605 231 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AL132822.1-201ENST00000617063 513 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 MIR6130-201ENST00000619419 109 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 TAB3P1-202ENST00000452645 1634 ntBASIC4.28□□□□□ -1.72
TLR9Q9NR96 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TLR9Q9NR96 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.28□□□□□ -1.72
TLR9Q9NR96 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AL356489.2-201ENST00000566968 3528 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC244517.1-201ENST00000606030 2086 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU6-179P-201ENST00000363350 107 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 SNORD35B-201ENST00000363660 87 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU6-1284P-201ENST00000363701 100 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RHOT1P2-201ENST00000366423 333 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU6-1029P-201ENST00000384109 107 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 SNORA5A-201ENST00000384111 134 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AL356057.3-201ENST00000402607 340 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU4-78P-201ENST00000410940 126 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU6-1304P-201ENST00000411374 106 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 RPL32P28-201ENST00000443577 397 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 MTND5P22-201ENST00000458380 195 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC008481.1-201ENST00000463278 396 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 Y_RNA.682-201ENST00000516457 100 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RNU6-1092P-201ENST00000516955 87 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC022634.1-201ENST00000520765 532 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 APOOP3-201ENST00000536787 586 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 RPL23AP87-202ENST00000573039 466 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 XIAPP1-201ENST00000603162 600 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC005344.1-201ENST00000613391 459 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 uc_338.11-201ENST00000619132 160 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 uc_338.22-201ENST00000622722 187 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC244517.12-201ENST00000623581 663 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 AL078596.1-201ENST00000624856 447 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TLR9Q9NR96 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TLR9Q9NR96 MTND4P14-201ENST00000435799 1354 ntBASIC4.27□□□□□ -1.73
TLR9Q9NR96 AP001350.1-201ENST00000601906 1524 ntBASIC4.26□□□□□ -1.73
TLR9Q9NR96 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TLR9Q9NR96 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.26□□□□□ -1.73
TLR9Q9NR96 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TLR9Q9NR96 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TLR9Q9NR96 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TLR9Q9NR96 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TLR9Q9NR96 EXOC5P1-201ENST00000510543 1969 ntBASIC4.26□□□□□ -1.73
TLR9Q9NR96 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TLR9Q9NR96 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TLR9Q9NR96 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms