Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL589872.1-201ENST00000426602 288 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 NDUFB4P2-201ENST00000509515 391 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC091133.4-201ENST00000511142 308 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL117351.2-201ENST00000513571 157 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC017037.2-201ENST00000513850 890 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 RNA5SP468-201ENST00000516782 93 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AP003467.2-201ENST00000520175 319 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 PSMA2P1-201ENST00000526365 646 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC004486.1-201ENST00000546846 233 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC245505.1-201ENST00000556398 224 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AP003465.2-201ENST00000602571 373 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AL161729.4-201ENST00000604650 476 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC069200.1-201ENST00000609511 323 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC091834.1-201ENST00000614543 472 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC244517.1-201ENST00000606030 2086 ntBASIC3.38□□□□□ -1.87
UPF2Q9HAU5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPF2Q9HAU5 AC000403.1-201ENST00000613696 3585 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNU6-259P-201ENST00000383999 107 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNA5SP120-201ENST00000410900 112 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNU6-195P-201ENST00000411352 109 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 SSXP9-201ENST00000417503 292 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AL158156.1-201ENST00000422509 473 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AL049734.2-201ENST00000441066 616 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RPL17P49-201ENST00000443728 411 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RPL37P4-201ENST00000448908 268 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 PRSS3P4-201ENST00000453323 162 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 SRRM1P2-201ENST00000464531 1192 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC112204.1-201ENST00000502591 103 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC083906.5-201ENST00000503722 328 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 HSPD1P15-201ENST00000505573 1122 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AF213884.2-201ENST00000510417 903 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 SNORA18.6-201ENST00000516792 115 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNU6-430P-201ENST00000517078 107 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNU6-201P-201ENST00000517100 61 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 OR4P1P-201ENST00000530808 1136 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC126177.3-201ENST00000551839 688 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MIR3670-2-201ENST00000582974 65 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MIR3670-1-201ENST00000584160 65 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MIR3670-3-201ENST00000584855 65 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 TPMTP1-201ENST00000592307 737 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AL022154.1-201ENST00000604698 785 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 MIR3670-4-201ENST00000612260 65 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC008250.2-201ENST00000615261 205 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AP001506.1-201ENST00000615444 211 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC009159.1-201ENST00000618386 642 ntBASIC3.37□□□□□ -1.87
UPF2Q9HAU5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPF2Q9HAU5 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC092125.1-201ENST00000562568 1995 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 Y_RNA.582-201ENST00000391023 95 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 RPS3AP36-201ENST00000398190 775 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 RNU6-712P-201ENST00000410558 100 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 ELOCP17-201ENST00000414751 326 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 RPL7P10-201ENST00000417407 739 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AP000705.1-201ENST00000454567 350 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 SNRPFP4-201ENST00000456366 242 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC093899.1-201ENST00000457984 376 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 RPL7P49-201ENST00000471402 708 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MTND1P3-201ENST00000484956 952 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC105252.1-201ENST00000503089 286 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms