Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 FCF1P1-201ENST00000432690 571 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RPL36AP6-201ENST00000435770 321 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC104850.1-201ENST00000435940 476 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC006028.1-201ENST00000438379 402 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RPS24P1-201ENST00000438550 371 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RNU6-420P-201ENST00000458780 107 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 KLF3P2-201ENST00000465138 268 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 CASP1P1-201ENST00000526345 212 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 MIR5680-201ENST00000577577 84 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC015871.2-201ENST00000603605 948 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC008962.1-201ENST00000605729 304 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AC006566.1-201ENST00000608943 513 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AL161734.1-201ENST00000609720 557 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 MIR6852-201ENST00000621699 66 ntBASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1BQ9H9Y6 AL049641.1-201ENST00000441055 1948 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AL353743.1-202ENST00000431724 1695 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 CR848007.1-201ENST00000442354 1699 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC068647.1-201ENST00000489539 2265 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC073343.1-201ENST00000328239 651 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 RNU2-36P-201ENST00000410361 191 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 BX323014.1-201ENST00000412876 237 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC016907.1-201ENST00000419483 435 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 USP9YP36-201ENST00000424581 829 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 ISCA1P6-201ENST00000427740 390 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 HMGB3P12-201ENST00000438745 556 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 Z82210.1-201ENST00000440037 231 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 RPL30P14-201ENST00000482744 348 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 TTC39CP1-201ENST00000512513 755 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AP006245.1-201ENST00000522549 120 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC022616.3-201ENST00000523940 148 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC034105.3-201ENST00000565294 442 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 MIR3167-201ENST00000579623 85 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC079089.3-201ENST00000603094 673 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC174048.1-201ENST00000603389 144 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AL161729.4-201ENST00000604650 476 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AP002360.4-201ENST00000606980 481 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AL589743.7-201ENST00000612637 233 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC005332.10-201ENST00000612725 619 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC022149.2-201ENST00000621061 203 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 MTND1P37-201ENST00000636562 264 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 AC007656.2-201ENST00000624902 4547 ntBASIC3.34□□□□□ -1.87
POLR1BQ9H9Y6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
POLR1BQ9H9Y6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
POLR1BQ9H9Y6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
POLR1BQ9H9Y6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.34□□□□□ -1.88
POLR1BQ9H9Y6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
POLR1BQ9H9Y6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 RN7SKP111-201ENST00000410349 271 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC126124.2-201ENST00000413542 321 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC092047.1-201ENST00000424997 240 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 MED13P1-201ENST00000428342 171 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 RPL23AP69-201ENST00000431134 458 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 HMGB1P27-201ENST00000431429 603 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 SNRPGP6-201ENST00000451124 220 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AL160314.1-201ENST00000490836 438 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-430P-201ENST00000517078 107 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AP006587.4-201ENST00000526053 529 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms