Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC103810.6-201ENST00000606708 136 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 VIS1.1-201ENST00000610517 203 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU4-82P-201ENST00000362443 140 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-754P-201ENST00000391166 107 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AF228730.1-201ENST00000397972 663 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU4-65P-201ENST00000410473 140 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 HSPE1P1-201ENST00000421494 318 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC234781.2-201ENST00000426370 994 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 MTCYBP39-201ENST00000437562 491 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL512286.1-201ENST00000439244 400 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RPL7P36-201ENST00000444633 681 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC133134.1-201ENST00000466800 359 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 SETP11-201ENST00000473027 690 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 BZW1P2-201ENST00000473537 826 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TBCAP3-201ENST00000512475 312 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-711P-201ENST00000517255 106 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 SETP2-201ENST00000553886 926 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC025281.1-201ENST00000567026 265 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 MTCYBP22-201ENST00000603788 447 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC106900.2-201ENST00000604994 317 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC004696.1-201ENST00000614345 607 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC079597.1-201ENST00000624306 508 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC006927.3-201ENST00000638789 384 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 MIR449A-201ENST00000362113 91 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SNORD114-30-201ENST00000364448 72 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 RPS3AP26-201ENST00000398259 784 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AL359704.1-201ENST00000411586 781 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 MTND1P21-201ENST00000412991 285 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 GDI2P2-201ENST00000445131 608 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC008571.1-201ENST00000467232 300 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 RN7SL636P-201ENST00000497504 294 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC091489.2-201ENST00000566263 604 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC105224.1-201ENST00000587055 421 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC112187.2-201ENST00000604345 283 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC008962.1-201ENST00000605729 304 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC122133.1-201ENST00000613964 233 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 MIR7844-201ENST00000616161 122 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC011460.1-201ENST00000636268 1834 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC069528.2-201ENST00000624849 1991 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 RNU6-173P-201ENST00000364215 104 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 DEFA7P-201ENST00000382676 285 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 RNU6-637P-201ENST00000384050 107 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL031577.2-201ENST00000404133 280 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms