Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC103810.6-201ENST00000606708 136 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 VIS1.1-201ENST00000610517 203 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU4-82P-201ENST00000362443 140 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-754P-201ENST00000391166 107 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AF228730.1-201ENST00000397972 663 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU4-65P-201ENST00000410473 140 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 HSPE1P1-201ENST00000421494 318 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC234781.2-201ENST00000426370 994 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 MTCYBP39-201ENST00000437562 491 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL512286.1-201ENST00000439244 400 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RPL7P36-201ENST00000444633 681 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC133134.1-201ENST00000466800 359 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 SETP11-201ENST00000473027 690 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 BZW1P2-201ENST00000473537 826 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 TBCAP3-201ENST00000512475 312 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 RNU6-711P-201ENST00000517255 106 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 SETP2-201ENST00000553886 926 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC025281.1-201ENST00000567026 265 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 MTCYBP22-201ENST00000603788 447 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC106900.2-201ENST00000604994 317 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC004696.1-201ENST00000614345 607 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC079597.1-201ENST00000624306 508 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AC006927.3-201ENST00000638789 384 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
RNF41Q9H4P4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF41Q9H4P4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.84□□□□□ -1.96
RNF41Q9H4P4 MIR449A-201ENST00000362113 91 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SNORD114-30-201ENST00000364448 72 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 RPS3AP26-201ENST00000398259 784 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AL359704.1-201ENST00000411586 781 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 MTND1P21-201ENST00000412991 285 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 GDI2P2-201ENST00000445131 608 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC008571.1-201ENST00000467232 300 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 RN7SL636P-201ENST00000497504 294 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC091489.2-201ENST00000566263 604 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC105224.1-201ENST00000587055 421 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC112187.2-201ENST00000604345 283 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC008962.1-201ENST00000605729 304 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC122133.1-201ENST00000613964 233 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 MIR7844-201ENST00000616161 122 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC011460.1-201ENST00000636268 1834 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 AC069528.2-201ENST00000624849 1991 ntBASIC2.83□□□□□ -1.96
RNF41Q9H4P4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF41Q9H4P4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 RNU6-173P-201ENST00000364215 104 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 DEFA7P-201ENST00000382676 285 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 RNU6-637P-201ENST00000384050 107 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL031577.2-201ENST00000404133 280 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms